Id Trinity | FTRINITY_DN57521_c2_g1_i13 |
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Name Transcript | Ll_transcript_132961 |
Sequence | GCATGGACTTGTAAAGTAAACCATTAGGGTCAACCAAACGCGTGGAAGGTGATGTTGGGTCAAAGATATTACTCTTGGAAAATAGATAGATACACATGTG GTAGTGAACATAACAGAAACACTGCAAGATGTCCAAAATTATTCTATCTTCACCTTCACCAACCCTTTTTCCCTTAACCCTTTTCTTCATCCTCCTCCTC CTACTACACCCATGTGAAGCTGAAGATGTTGCCATTTACTGGGGTCAAAATGTGAAGGAGGGAAACCTTACTGAAACTTGTGCAACAGCAAAATATTCCT TCATCAATATAGCTTTTCTTACCACTTTTGGCAGCAGCAAAACCCCCCAACTCAACCTTGCAGGTCATTGTGACCCTTCTACTAATGGATGCACTTTGAT TGGGAGAGACATCATGAATTGCCAAAATCAAGGGATCAAGGTCATGCTCTCTATTGGAGGAGGATCTGAAGGCTCCTATGCTCTAACTTCTTCAGAAGAT GCTAAAAATGTGTCAGATTACTTATGGAACAATTTCTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATT TTGACATATATGGAACTAATTCACACTGGGATGAACTTGCACGTTACCTCAAGTCACACAACAATAACACAACTACAAAAACTATATACTTAACTGCTGC ACCTCAGTGTACATTTCCTGATTATTCAATGGGTACTGCCCTTGACACAGGGCTCTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGTGAT TATGGTAAAGAAAGTATTGACAACATTGTGAATGCATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTCGGGCTACCAGCAGATCCAG CAGCTGCGGCAACAGCAAAGCATTAACACATGCAGGAGTCATGACAGTGGCTTCACACAACGTTATGGTTTTGTGTCCATAGCTGGTGTTAAGGTTTATG ATGGTGATAAGAACATTGATGCAAAGTGCTGTGAGATCATATGTTGGAATAACTGTTCTTGCGAAGCTTACGCGCTAGTGAATCATAATAACAACACTGG ATGCCAGATATGGGGAAAAGGAGCGAGATTGATTAGAGATTCTGGAGAAAAGGGAGAGCCAATGATGCAAATCTACTTTGTTAAACACAAAGTGAACAGG TGGTGGATATGGCTCATAATTGGTGTTGGAGGAGCCCTTTCATTACCTGTGATCTTCTATTTATGCTATACCATCTGGAAAAAATATAAAGCAAAAGGTA AATACCGTATATATTTCTTTTAACAATTGTTATGAGTTCCAGGCCTCTCTTTTCTGTACCTTATAGTTTCATGTTACATCGTTAGTGGATAGAAAAATGA TGAAGAAGAAGTTATTACATGAGATTGGAGGTAATGCAATGCTTTCGATGGTGTACGGAAAAGCCAGGAAAAGAAAGAACAAGGAAAAGACAAACAATGA GGTGGAAATATTTAGTTTTGAAACCATTGTTGCTGCCACAAACAATTTCTCTGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGTA ATATCATTCTGCATACTTAAAGTGGAAGCTATCTGAATAAGAATTGATATAATTAATAACCATTTTCAGGGAACTTTAAGTGATCAGCAAGAGGTAGCAA TAAAGAGACTTTCTAAAAGTTCAGGGCAAGGGCTGATAGAGTTTAAGAATGAAGCTAAACTCATGGCTAAACTGCAACACACTAATCTTGTAAAGCTTTT AGGATTTTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTACATGTTGAATAAGAGCTTAGACTTCTACCTATTTGGTATGCTCTCTTTTATTGAC CATGTTTATAAAAATCTTCAAGATGATAGCATAAAGCATTTTTTGTAAGCACTCTTACTTGAAAACAGATTCAACTAGAAGGAATTTGCTAGACTGGGGA AAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGGCTAAAGGTGATACACCGGGACCTGAAAGCAGGCAACA TATTACTTGATGAAGAGTTGAATCCTAAAATATCTGATTTTGGCATGGCTCGAATATTTGGTCATAGAGGATCAGAAGAAAACACAAATAGAGTTGTTGG TACATAGTAAGTAATAAATGATCATGCATTTCCAAAATGCTCTATGTCTCATTGTGTGACATTTGTTTATAACTTCATATTGTTATCGCTGCAGCGGCTA CATGTCTCCTGAGTATGCAATGAATGGTGTTGTGTCAATCAAAACAGATGTATTCAGCTTTGGTGTATTACTATTAGAGATTCTAAGTGGTAAGAAGAAT AATAGTCGCTATCATCCCGACCGTCCACTGAGCCTCATAGGACATGTAAGTTTTCTAAATTGACTAAACAACAATCAAGACTTAATCTTACTTGGTAGAG TCGGCTATTTCCCAATACTGACTGATTCATAAAATTCATGCTTATCAATGGTTCATAACTTTTATGCCGATGCTCGGATTGTTGTAGGCCTGGCAGCTGT GGAATGAAGGCAGAGCTCCTGACCTAATAGACCCAGCATTTAATGAGTCAAGTAATGAGAATGAAGTTGTGAGATGTATTCACATTGGTCTATTGTGTGT ACAAGATCAGGCAACAGATAGACCTACAATGTTAGAGGTTGTTTCTTTTCTATCAAATGAAACAATCAAACTCCCCCAACCAAAGCAGCCAGCATTCTTC ATCAATGTTGCTGTGGAAGAGTCAGAGATTCCTAACAGTAGGCAAGAATATCATACCTTAAATGATGTAACAATTTCTAGTATGTATGGCAGATAGAATA TTATTATTTTGACACCAAAAAATATTAGATAATTTTGCATAGTACTTACTTTATTCAGCTTACACAATTATTGGCTACAAGTTTTGTTTTGTGAAGCAAA TACAAAGTGTGTATGCATTGGAAAAGAGGTGGTGATGTCACACACAGCCTAGCAAACAAACCATGTTACTTGCAGCCATTGTTAACAAATTCTATCATAC CACGACACACGACATAAACGCAGATCTCTGCAACTATCCTACTTGATAAGGGCCATGTTTCCAAAACATATGTATAAAACAAAAATAATAATTGTTCTTT GTGTATATCAATTCTTCCCCTCTACTTGAAATTTTAAATCTTAATCAAATTTATTTTATCTCTAATAACAAAGTAAAATCTTTATTCAATAGCTAATGTT TTCCACGTGTAAAAGATTAAGTGGTCCAAGTGTGTTTTACTTCCCCTTCTAGCATCCGAATCTGATCATAGTGGGACTAATAACAAAACAGAACTCATTT GTGTTGTGTCTTTGTTTCATAATAGAAAGACAGTTAAGTGGTACAAGTTTACAGTTACCTCTATAGTTAGCAACTAAAAAACATGTTATTGTGATGTTAG TGTTGTGTGATAGAGGAAGGTGGTGAAAATGGATTTTTGGCCAGAATAT BLAST |
Tissue | flowers |
Gene name | LI_gene_69351; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132961
Blastp | Acidic endochitinase from Vitis with 58.66% of identity |
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Blastx | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 from Arabidopsis with 59.84% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (100233088) |
CantataDB | Link to cantataDB annotations (CNT0001079) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458282.1) |
Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |