| Id Trinity | FTRINITY_DN57524_c3_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_130599 |
| Sequence | ATAAACCGATGATGACGCAGAGTAAGAAGCATTTTGATTCCTTTACTGTTCTCGTTCCTTCAATCACCATTTTCTGATCAAACACACTTCTTCACTTTGT CTCTCTTCCCTTCCTTCAAGACCAAATTCTTTAGAGAGAGAACAAAGTTGAGAGACAGAAATCAAATGGGTTCTCTCCCATCTTGGAGAAAAGCCTATGG TGCTCTCAAAGACACTACCAAAGTTGGTCTTGCTCATGTCAACAGCGATTACGCAGATTTGGATGTTGCTATAGTCAAAGCTACTAATCATGTTGAGTGT CCTCCAAAAGAGAGACACCTTAGAAAAATTCATTTTGCCACGACTGCTATACGACCGAGAGCTGATGTTGTTTATTGCATTCATTCCCTTGCTCGTCGAT TGGCCAAGACGCGAAATTGGACGGTTGCACTGAAAACACTAATAGTCATCCATAGGTTGCTGAGGGAGGGAGATCCTACTTTTAGAGAAGAGCTTCTTAA TTTTTCTCAGAGGGGACGCATTCTCCAACTTGCTAATTTCAAGGATGATTCTAGTCCAATTGCTTGGGATTGTTCTGCCTGGGTACGTACTTATGCATCA TTTTTGGAAGAAAGACTTGAATGTTTCCGGGTTCTGAAGTATGATATAGAAGCTGAGCGTCTACCCAAGCCTGCCCCAGGACAGGAAAAGGGGCACAGCA GGACCAGGGATTTGGATACTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAACAGCTGCTTTATCGTCTTGTTGGTTGTCGGCCGGAAGGAGCAGCTTT TAGAAACCATGTGATACAATATGCCCTAGCTCTGGTACTAAAAGAAAGCTTTAAGATCTATTGCACTATTAATGATGGCATTATCAATCTTGTTGATAAG TTTTTTGAGATGTCCAGACATGAGGCTATTACAGCCCTTGATGTCTATAAACGTGCGGGTCAGCAGGCGGCAAGTCTCTCTGATTTCTATGAAATCTGCA AAGGGTTGGAGCTTGCTAGGAATTTTCAGTTTCCTGTCTTAAGAGAGCCTCCACAATCTTTTCTTACAACCATGGAGGACTACATAAGGGAAGCACCAAG AGTTGTTATGGTTCCAACTGAGCCATTGCTGCAATTGACTTATAGACCAGAAGATGATGTTCTCACAATTGAAGACACTAAATCATCTGTTGAAGAACAG GAGCCATCGGTGCCTGTTGATGATGTTGTTGTCTCTAACTCTGAGCCTGCTCCTCCTCCTCCTCCACCACCTCCTCACAACAATTTTGAAACTGGAGACT TACTGGGGTTGAATGACATTACTCCTGATGCTTCATCTATAGAAGAAAGAAATGCTCTCGCCTTAGCTATTGTCCCCTCCGAAACTGGAACAACACCAAT TGCTGCTCAAGCAACAGATTTTGATCCATCCGGATGGGAGCTTGCTCTGGTGACCACAAGTACCAATATTTCTTCAGCCAATGAGAGACAATTGGCTGGT GGATTGGATTCTCTTACCCTTAACAGCTTATATGATGAAGGAGCATATAGATCTGCACAGCAACCAGTATATGGAGCACCAGCCCCAAATCCATTTGGTG TGCAAGATCCTTTTGCTTTTTCAAGCAGCACCCAAATGGCAGTGATGCCTCAACATCAAGTCAATCCGTTCGGTTCGTACCAACCTTATCAGGTACAGCA GCCACATATGATGATGAACCCAGAAAATCCTTTTGGGGATGCAGGGTATGGAGCATTTCCTGTGAATTCAGTTTCTCACCCACAGCATAACACTCCATTT GGAAGCACTGGCTTATTATAAGAACACTATTTTGTTATAAGAACAATGTTTTGGAGATGCTATGTATTTAATCAATCAAGTTGGTTTTGGTTGCTAGTTA GATGGTTTTTTCGAATGAAATGATTGTAAAATTTAGATTACATATTTGTCAGAGTGATGGGTTTTCTCGATGTGTACAATGTTTATATACTTTGGAATTA AGTTATATATTTAATATGCTATACGCGATAGATGAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69403; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_130599
| Blastp | Putative clathrin assembly protein At2g01600 from Arabidopsis with 72.15% of identity |
|---|---|
| Blastx | Putative clathrin assembly protein At2g01600 from Arabidopsis with 70.88% of identity |
| Eggnog | Clathrin assembly protein(ENOG410XQ90) |
| Kegg | Link to kegg annotations (AT2G01600) |
| CantataDB | Link to cantataDB annotations (CNT0000240) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437441.1) |
| Pfam | ANTH domain (PF07651.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |