Id Trinity | FTRINITY_DN57536_c1_g1_i15 |
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Name Transcript | Ll_transcript_131493 |
Sequence | CTGGAATGTGTGGTTATGGGAGTAACTGCCGCTACAATCACCCGACTAATGTTTTACCGGTAATGGAACTCTTTCTTTTGTTTCCATTCGCGTTCTTCTT CATATAGATGAAGCGTCTCCTTTTCTAAGTGTAATATTTGACCAAAATAGTTTGTGAATTTGTTATCTTTTAATGCCCCTGGTAACTTACTTTCCAATAT GCTCTTTAGTTTCATAATGTGTAAGTAAATTGTGGTTTCTCACACTTAATTAGATTTTCAGGGTACTCATTATGGTGAAGAACTTCCTGAGAGAATTGGG CAACCTGATTGTGAGGTGTGAATCTTTTCGTAATTAAAATGCATCTGTTTCTCTATGCCTTTCTTATGTTGAATGTTGCTCCATGATGTGAATGCTGTTC CCCATGCTTCCTTTCTAAAATTTGATCTGGTCTATTATTAAAAATTGTAGCCATAGTGATTACCAGTGTGTTATTAGCAAATTAATACATGAAGAATTAA ATGAGCTAGGTATCTCATGAGATGGACGGAAAGTTAATGTTTATGCTGTGCACAGTAAAAGAGGAAATAGATAATTGGGTTTTAGTTTCATGTCTGTTAT TCTAGAAATCTCGATTTCAGGAGCTGGAGTATAATCTGAAAATGTTCATAATTTGTTTATGGAAGATATTATATAGTCCATTATTGTGATCGATTTCATT GCAATTCCAATGCATAAATACATTTTGGGGTTATACGACCCACACAAGTGGTAATTTAATATCTGGTTTGGAGTACACATTGCAGTATTTTCTTAAGACA GGGACATGCAAATATGGCTCAACATGTAAATATCATCATCCAAGGTATAGGCAAGGTGCTGCTCCTGTATCATTCAATTCTCTAGGCCTTCCTGTCCGTC AGGTTTGTACATCCCCTCACACCTGCAGATCTATTTTTTTCCAAACTGATTGCTATTACTGTGCTGACGGAAGGCATGTCCGCCATTGCATTTTTTTCCG AACATTCTTTGATTGTTGATTTAGGAAGAAAAACCATGTCCATATTACATGAGAACTGGGTCTTGTAAGTTCGGAGTCGCATGCAAGTTTCATCATCCAC AGATTGGAGCTTCCCTTGTGACTGGATCTCCTACCTCAACAATCCTTCCCACATCGGGCTTACCATATGTTGGTGGTATTTCTGCATGGCAATTACCAAG AATGTCATATTTATCTGGGCAGGGCATTCAATCTTATGTGCCACCTTTTCTGTCTTCTCCACAAGGCATTATACCTGCACAGAACTGGAACACCTACATG GTTAGTTAAGGCTGTTGAATTTCCTATTTCGTATATGCATTTGCCGTATGCTATATTCTTTATTATTTTCTTCCATACAATGGTATCCTATCATTGACTA TGATGCTGACTGGTTGATTTCTGAGCATAAATGATTTCGAGGGCTGTATAGGTGGGCTAATTGTTAGTGTTAAAAAAGAGGAGTTCATTACTGTATAACC TTCTTACTGAAATGTTACCACGTATGGAAGTTTCGGACAAATGTATGTAGCATATATCTAGATAAGTAGACATTGCAAGATACTTTAAAGAAAGTGATTT GTGCATGAAATTCCTCTTATTCCTTACACCCCCGTCATTTATTTTTATTAATTGCCAAGCGCATTTGACATCCATACTTGCATACACTTCATGACATTCA TACATTATGTTCGGATTTGCTTATTACATAGTGTCAATTGTACTTTATGTAAATTAAATTAAGATTTTTTTTATTTGACCGGTTTTGTCTCTCATATTAG GGAAGTATGAGCTCTGCAATGCCTACCACTTTTCTTGGATCTAATTTTGTCTATGACACCATGAATCTGGGTGAATCGCTTCTTGGTGGTCAGGTAATAA GTCCAACTCTCCCTGAGAGACCTGATCAACCAGAATGTAGATACTTTATGAGCACTGGTACCTGCAAATATGGATCTGATTGCAAGTATCATCATCCAAA AGAAAGAATCGCTCAATCATTGATGAATCCACTTGGTCTTCCTGTCAGACCTGTAAGTTCAGTTTGTAGTTGATGCTTACTTGCAATGCGAACGATTTTA TTCATATTATGATCACTAATATGTTACCAAGATATTAGCATTTTCCATATTGGCTATAATAAGGCTATGGTTACTTTGATTCCAATCTTGGTTATTTGCA GGGGCATGCTATATGTTCATACTATAGACTCTACGGAATATGCAAGTTTGGTCCAACATGCAAATTTGATCATCCA BLAST |
Tissue | flowers |
Gene name | LI_gene_69493; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_131493
Blastp | - |
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Blastx | Zinc finger CCCH domain-containing protein 3 from Arabidopsis with 46.39% of identity |
Eggnog | zinc finger(COG5063) |
Kegg | Link to kegg annotations (AT1G04990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455850.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |