| Id Trinity | FTRINITY_DN57540_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_131085 |
| Sequence | CTTGAAAGTTCACTTACACATATCCTATTATTCTACCATATATAATCATATTCATCTACTCCATTACACGTGGAAAACAAAACTGAAGTCTAAAAAACTC CAAAATCTGCAAAGAATCAACTTATCATGTTTTAGAAAAAGTTTAATATAATTTTCTCTATCTCCATCATACAAATTTATATTCCTTCTCTATCTCCAAG TTCTATTCTATGATGACAGAAATAGAATCAGAAAAAACGTGCAACTCACCCAACAGGTTCCTTTCTCTTCCCAAGCTGACACGTCATTTCAACCACCAAA GCACTTTTCCCCCTTAATTTCATTTTCATTTCTTCCCAAATTCTCTCCCTTCTGCCCACAGTTAAATTACCCTGTCTTCTTCAACAACTCGTTGTTGTCT ACCTGAAATTTTCAATTTTTAGCTTTCCCAAATGAAAATTCAAGTAATTTATTTCATTTTTTGACCCCGTGCTTCAGAAATTTAAACGAACTTTGTTGCC TTATGTTGAAAAGATTGTATCTTTGTTGATCATTGTTGCCTTTGAGCATCTGGGTCGGTGAGGAATTGCCGGATAATCACGCTGCCACCGGCTTTGATGG ATCCTTCATTGTTGAAATCATCGCCGGTGAGCTCTGACATCGTTTCTGAGAGATTGAGTGATAAATTCGAAGATCTTAGAGGTTTGCAGTGGCGTATAAA TCTTGGGGTTTTGCCTAATTCTCCTTCAACTTCCATTGATGATCTTCGTCGTGCCACCGCTGATTCTAGAAGAAGTTATGCCAGTTTGAGAGGGCAAGTC CTGGTTGATCCACAAAATTCAAAGGATGGAAGTAGTTCACTTTCACCCAATCTTATTATGGACAACCCACTCTCACAAAATCCAGATAGTACATGGAGTC GCCATTTTCGCAATGCAGAGCTGGAGAGGATGGTTGATAAGGATTTAACACGTTTATACCCAGAACATGGCAGTTATTTCCAGACACCAGGATGCCAAGG CATTTTGAGACGGATTTTATTATTATGGTGTCTGAGACACTCAGAGTGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTTTGCTTTATGTTCTC CAAGTTGATCTGGAGCGTCTTTCCGAAGTTCGAAAGCTTTATGAAGATCTCTTCACAGACAGATTTGATGAACTTTTATGTCAAGAGAATGATCTTTGTT ACAGCTTTGAATTTCGAAAATCTCAAGACTCGTTGGACGATGAAACTGACACCCACGGAAAGGCAATGAAAGTCAATAGTCTTGATGAACTTGATCCTGA GATACAGACCATTGTATTGCTAAGTGATGCTTATGGTGCGGAAGGTGAACTGGGTATTGTTTTATCAGAGAAATTTGTGGAACATGACGCTTACTGTATG TTTGATGCTTTAATGTGCCATGGTTCAGTTGCAACGACCGATTTCTTCTCTTCCTCTCCTATAGCAGGTTCCCTTAGTGGCCTCTCCCCTGTGATTGAAG CTTCTACTGCAATTTATCATTTTTTGTCTCTTGTGGATTCATCTCTACATAGCCATCTTTTGGATCTTGGGGTTGAACCCCAGTACTTCTCTCTCCGATG GTTGCGAATTTTATTTGGACGAGAATTTTCACTTGACAACCTCTTGATCATTTGGGATGAGATCTTTGCCTCAGATAATAATAGCAAAGTGGAAAAAAGT GCTGGTGATGGCATAGAGAGGAGGTTCAGGATCTTACATTCACCTCGTGGAGCATTTATCTCAGCTATGGCTGTGGCAATGTTACTCCATGTAAGATCTT CACTCCTTGCAGCTGAAAATCCGACAACCTGTCTCCAGAGATTATTAAACTTCCCTGAAGACATTAATATTGGAAAACTCCTAGAGAAGGCTAAACCCTT GCAGGCTCTTGCATTAAGTGTCGATATTTCATCCTCTTCGCCTTTGTTTCTAGGGTCTCATCACCAAGGTAAATCAATGCTTCCGAGATCTGGGACTCTT CAATCTGAATCTGTGTCTCCAAAAACACCTCTGAATTTGTTACCTGATAGCTATTGGGAAGAAAAGTGGAGAGTCGTCCACAATACTGACGAAAATAAGC AAGATGATGTACAAAAATTGATTCCAACTCGTAAAAAGGGATGGACAGAAAAGGTCAAAATCAGTTTGAGAAGAACGGAGTCTGATCCACCTCCATCGAG GATTCAAGGTGGGAAAAAGTTACCCAGGGCATCTGTTAGGCGCAGTTTGGTAGAAGATCTTCGTAAGGCACTTGGCTCGGAGGAAGATACAGAACAAACG AACTGTCATGAAATCCTGTGTCAGCATGATAATCTTTCCGAAGCGGTTCAAGTAGAGCGACAAAATGGTAACTGTAAAGGTGACAACAATTGCTCATCTG ATGACAGATGTCCAAGTGGAAGTGCAGGCAGTGAAGACGACTTGTCTGACCGGACTAGTACTCCAAATGAGACCAATGATCATGAAATTACCTCGGTGAA AAGTAGTGTTGCATCTAATTTATCCGTTGATGAATCCAATGAATCTTCACAAACCAGCCTCAATGGTCGATGTGCGTCGATCTCTGTTCCTCCTGATAAC ATACCTGAGGCGCAAGGGTCCAATGACAACAATGAAGCAAATCCAGCAACAGATCCTAAGGAAAGAAAACAGAATAAATTCCAGTGGTTATTTAAGTTCC GGCGGAATACTGTTGACCTTATCTCTGAGAAAATAGGAGGTGCTGTGGACGCTGCAAAATCAACCAACAGTCATAGCAATCAAAGTAATACTCCATCACC GGCATCTTCTACCGCAAATGCGCATGGTAGTTCCGTTACCTGCAAAGGAGATTCCGTAGACCAGAATATGATGGGTACTTTGAAGAATATTGGACAGTCT ATGCTCGACCATATTCAGGTAAAGTTCTTTCTCACTATCACCCTCACTTCCAAATTCAATGACAAGCTATTGAGTGAAGATATGTAGAAGAATTTGAAGG TTATCCCCCTTAGTTTTATCGATATTTTATCCATGAAAAGCGGTTGAATGAAATTCCTGCAAAACAACATCTTCGCTTGCGAAGATAGGTAAGATTGCAT ACACCTACCATCCACATACTCCACTAGGTAGGACCCTCGTGTACAGAGCCACAACTTTTTCGGCCGAATGAAAATGCTGTAGAACTAAAATCGATATATG TTCCTTTCCCTTGGTTTGATTTCATTTTTGTGGTGCAGGTAATTGAAACAGTTTTCCAACAAGACAGGTCTCAGGGAACCTCAGTGGAGAACTTATCTAA GAATGTTCTTGTTGGCAAAGGCCAGGTTACTGCCATGTCAGCTCTCAAGGAGCTTAGGAAAATTAGCAATATTTTGTCTGAAATGTGAAATATGAGGTGA ATCTTGTATTAACATGTATATAGATTTTGTAGCTACCATTCTTTAGTGAAATAAAATGAGTTTCTTCTACTTCATTTCAAGTATCCATTGAGATGAATAT GTAAGTACTTGTATTTGGATTACATTAATAAATGCAAGCAAAAATATTATTTTAGTCTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69525; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_131085
| Blastp | TBC1 domain family member 5 homolog A from Dictyostelium with 25.16% of identity |
|---|---|
| Blastx | TBC1 domain family member 5 homolog A from Dictyostelium with 24.3% of identity |
| Eggnog | TBC1 domain family, member 5(ENOG410YX8Z) |
| Kegg | Link to kegg annotations (DDB_G0280253) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449861.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |