| Id Trinity | FTRINITY_DN57542_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_132888 |
| Sequence | GCTGATAATATGCATGATAGGGATCCGACGCGCTCAGGAAATTAAACTTGGCATTGCCTGTGTTGTTTGCAACAATCCTCTTTTCAAACTCTGGACCATT GTTGACAAAACCGCTCAGTTTGTGGCGAAAAATGGTCCAGAGTTTGAAAAGAGGATTGTTGCAAACAACACGGGCAATGCCAAGTTTAATTTCCTGAGCG CGTCGGATCCCTATCATGCATATTATCAGCACAGGTTGGCTGAGTTTCGGTCTCAGAATCAGTCTTCTGGTGGGCAATCCACAGACTCACCTGTTCGTGA ATTAGCCCCATCTGCAACTGCCTCTGACAGCAATGACGCCACAGCAGCAGCAGCAGAAAAGCCTGATATTTCTGCTCAGTTCAAACCTGTGAGGAAAGTG CTTGAACCCCCTGAAGCTGAGCAGTACACAGTTCGGCTTCCCGAAGGAATTACCGGAGAAGAGCTGGATATTATTAAGCTCACAGCACAGTTTGTTGCTC GAAATGGTAAATCTTTTTTGACAGGGTTGACAAGTAGGGAAGTTAATAACCCCCAATTCCATTTCTTGAAACCAACACATAGCATGTTTACCTTTTTTAC TTCTCTTGCGGACGCATATTCTAAGGTTTTGATGCCTCCAAAGGGTTTGACAGAGAAGCTGAAGAAGAGTGTCCCTGACATGACTACTGTGCTTGAAAGG TGTGTGAATAGGCTGGAGTGGGAGCGTTCGCAAGAGCAAGCTAGGCAAAAGGCTGAGGATGAGATAGAGCAGGAAAGGGTACAAATGGCTATGATCGATT GGCATGATTTTGTAGTGGTTGAAACAATAGACTTTGCTGATGATGAGGATGAAGAGTTACCTCCTCCTATGACCATTGAAGAGGTTATAAGGAGAAGCAA GGTGACAGCCATGGAAGAAGATATCATTGAACCAGGAAAGGAAATTGAAATGGAAATGGATGAGGAAGAGGCCCAGCTTGTTGAAGAGGGCATGCGAGCA GCTAGTTTGGAAGACAATGATGGTGAAGTGAAGAATGAAGTCAGGGTTACTGAGGATCCTGAACCACCAATGAGGATTGTAAAGAATTGGAAGAGGCCAG AGGATAGGATTCTTGCAGAAAGAGATCCAACCAAGTTTGTTGTTTCTCCTATCACTGGTGAGCTAATTCCCATTAGTGAAATGTCAGAACATATGCGTAT TTCTCTCATCGATCCCAAGTACAAAGAACAAAAAGAAAGGATGTTTGCTAAAATCCGAGAGACAACACTTGCTCAAGATGATGAAATCTCAAGAAATATT GTTGGACTTGCCCGAACCCGTCCTGATATCTTTGGTACCACTGAAGAAGAGGTCTCAAATGCTGTCAAGGCAGAGATTGAGAAAAATGACGAGCAACCTA AACAGGTTATATGGGATGGTCACACTGGCAGTATTGGCCGTACTGCAAACCAAGCTTTGTCACAAAATATTGGTGAGGATCAAAATGATGCTTCTAATAA TGAAGCCATGAACCTTCCTGGTCCTGCTGCACCTCCTCCTAGACCTGGAATGCCTTCTATTCGTCCTCTTCCACCTCCACCTGGACTAGCATTGAATCTT CCTCGCGGTCCTCTCAATGCAGTCCAGTATTCTGCTCCTAACAGTGGTGGCTTTCAAATCCCTCAACCTAGACCTCCAGTCATGCCCATGATGCCATCTG TCCGGCCACCTCCACCTCCAATGCAAATGAGTTCTGGACAGCATATGGGTGGTCAACCACAACTAATGCATCCACCATATCAAATGAATAGCCAAGGAAT TCATATTCCTCCACCACCGGGGTCCCAGTTCACGCCTATGCTTGTTCCCCGACCTTATGCCCCTGGTCCACCATCAGGAATGCCAATGATGCATCCACCA CCATTGCCTCAAGGAGTGCCACCACTGCCACCACCTGATGAAGCTCCTCCACCACTCCCAGAAGAACCAGAACCAAAGAGGCAGAAGCATGACGATTCCA CTCTGATCCCTGAAGATCAATTTCTTGCCCAACATCCGGGACCTGTTCGCATTAGTGTATCTGTTCCTAACGTTGATGAAGGAAATCTCAAAGGACAGGT TCTGGAAATTACAGTTCAGTCTGTTTCTGAAACTGTTGGCAGTCTTAAGGAAAAAATTGCAGGAGAGATCCAGCTCCCAGCTAACAAGCAGAAATTGAGT GGGAAACCGGGCTTTCTCAAGGATAATATGTCACTTGCCTATTACAATTTCAGTGGAGGAGAAACACTGACCCTAACCTTGAGAGAGCGTGGTGGTAGAA AGAGATGAGCATATTACTTGCATGGCCATTCAAGAAGGTTGTTGTAAACTTTGCCCCATAATGAGGGGGGTTATGAGGCATATGGATTCCTATATTATTA ATAGACTGTTGCTATCTTCATGAATTTTATGTTGAATGCTTTCTGTCTATTTTATTCTGTGGTTTCTTTCGAAGTTTTTATTGTTGTCTTCAAAACTGAT GTTAATTCTCAAATACAGATTTTGGCACCTTGGCGCTTGTCCATTGAGGGGGATAGGAAGTAGTGGAGTTCCTTTATCTAATTTTATCAACTCAAACTAT ACATGACTGATTATTGTTCTCTTTTGACATTTCAGTTGATTTGTTCCGAAATTACTGATTTGTTTTTATTTGAAGCTCCTTCGCTGTTGGAGGGACCAGT TTACTTTTTTCCATTTTTCATATTTTGTTCATTCATGCTTGCAATGATCATCACGGAGTAGTGATTTTGGGTCTTTTGTCTTATTTTCTCCTTCTAGTGT TTAGGTTGTCTCATGTTATCGGGATATGTTCATACGAGAGTACAGGTGGGTGCTTAGAAGGCCTTTTCAGTTGCAAAGCATATTAACCTGCAACTGGTGC ATCTTGTTTGGGGTTTTAGTTACAAGGTTGTTTTATTTGGTTGTTACGGATCCTGAACTTAGATAATTAGAAGTAGTGGTTGGGATGGTTGTTGTTTTTT GATTTTGCTGTTTTGTCATAACAGAAATCCTACTTGGACTAATGGGAAAGGGCTGTGCAGCTTAGCCTGATGTGTCTTTGATTTGAGAAGAGGCAGGTAG TATGGTCTAAAATCTTCTTTGCGCTGTAGTAATTAATCCTTATGCTTGGATCTTTTGTTTTTTATTCTTTGAAGTTTTGGTCTGATGGCAGCTTGTGCCT GCCAATTTATTGCAGAATGGAGCAGGTTTGGTACTTTAAGAAGGCATGATTCATGTCTTCATTTTTTATTGGGATATCTTATGAAATTTAGTTTAAGCTA CTTATTGTTTATCTTGATTAAGAATATCTGGCTATGTTTAAATCCTCTTCAGTATCCCTCTGTCTACTTTTTATTAAGCAACAGATGCATTTAATTCACC A BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69536; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132888
| Blastp | Probable splicing factor 3A subunit 1 from Arabidopsis with 69.53% of identity |
|---|---|
| Blastx | Probable splicing factor 3A subunit 1 from Arabidopsis with 74.16% of identity |
| Eggnog | Splicing factor 3A subunit(ENOG410XPNW) |
| Kegg | Link to kegg annotations (AT1G14650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427878.1) |
| Pfam | Surp module (PF01805.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |