| Id Trinity | FTRINITY_DN57559_c6_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_132770 |
| Sequence | TAAAGACATTGGTAGCTTCATACACTATTATGTGGCTAAGAATAAAGCAAGTAGAAGTAGCTTTTGTGTTTCTCTAAAATTAATGATAATGGCTTCATCA TGGTTTGGAACTACCATTACTATTCTTCCATTTCAATTCTATAACAAACTTAACAGAAACCCAACATTAGTTACTTTCAGTTGCACTAACAAACACAAAG ACAAAGACCATGTTCCTCTTTCTGTTTCTTCAGCTTATGATGTCCTAGGAGTTAATCCTCATTCTTCTCCCTTTGATATAAAAGCTGCTTTTCGGTCAAA AGTGAAGCAGTTTCATCCAGATGTTAATAGAAATGAAGGGAATTCTGATGCTATGATTCGTAGTGTAATTCAGGCATATCAGATACTATCCAACTACACC AAAGCAGAGATAATTGAAAGGGAATGCTTAGATCCCTTTGACACACCAGAGTGTGAAGCTTATGATCTTTTTGTTAATGAGCTTCTTTGTGTTGGCAAAG GGTGTTCAAATTCATGTGTGGAAAGATCCCCTCATGCTTTCACGTATGTTTCTTCAACTGGAACAGCACGTGCATCTTCTCAAGGTGTTTGGCTTATATA TGATTCAGTTTCTTAATTTTGAGCAAGGGATATATGTAAAGAATATCTTGTCTTCACATATTTTAACTTCTTCTATACAAATAACATTTCGAGTAAAGAC TTATTTAGTTTCTTATATTTTTTGACCTTACCAGTTTAGTCTCTCAATAGTTGAAATACCTAAAATAGTCTTAAAAAATTTCAAATGTGAGTCAAATTAG TCTTTTTTAGCATGTTTTACAATACTTGATAGAGACTAATTTAACCTTAAAAAGGACTAATTTGACCTACATTTAAACTTTTTATGGACCATTTTGGGTT TTCCATTTTGTGAAGGACCAAACTCATAAGGTTAAAAAATATAAGGGATTAAAATTGATATTTACTCTAACATTTTTTGGTAGTTATATAAATACTATCA TGGTTGATGAATACTTTAGGTCATGGTGATGATTATCGAGTTCAAAGTGCTGTTGGACAATGCCCTAGAAGTTGCATTCATTATGTAACTCCATCACAAA GAATTATATTGGAGGAGCTACTTGATAGGTAACCTTAATCGTTCCCTAAAACTTTACTTGCTTCACTTTCCCATTTATTTTATTATTTCTTTATCATATA ATGTTGGGTTTATTCAAGTTTGAAGTCTTGCATTAGATATGACGGATGAACGAAAGAGTTTATAGATGGAAAAGACTAATTGAACTATTGTCTTAAGGTT TTGGGTGAAGATGTGGTGTCTCACTTATGCCTCTTCACTCTTCCTCATATCCTGATAACAATAGGACTCCACTGCGATTGGAGGCTCGGCTCCCCGACCA TGAACGGGTCGAACAAGTGGTATCAGAGCCTACAGTTTTGCTGAGACATGATGAACTATAAGGGGGAGCGGACCGATAGTTGTGTGGTACCCACACGTGA GGTGGAGAGATTATTGTGTTTATTCAAATGTGAAGTCTCACATTGAATGGGTATATAAGCGGAAAAGGCTAATAAAATCATTGCCTTATGATTTTGGTTT AAGGCGTGATTGGAGGCTCTTCAATCACGCCTTATGTCCCACTTGTGCCTCTTCAATCTTTACATGTTTCAGTAACAATAGGACTCCCCTGTGGTTGGAG GCTCTCCAGCCACGGTCGAGTTCAACATATAGAATGCTACCATTCTTATGCAATCCATTCCATTAGTCTCTAATTTCCTTTTGTCTGATTTTGCAGTGTA GTAGGTGCACCTTATGATACATCAGCTGAGGCAGACATGCTTTATTCACTCATAACTAAAGCTAAGTTTGAGAATAACAGATACCAAAAGCCAAAGAAGC AACCCAAAAGTTCAAGCCAACATGTTGATTGGTTTTAACATTTGGATACCAACTATGCCTATGTTAATGTCTTTAGTCCCCAACCTATGGCACTGTTTAG TGAGACGTTGTTTTTAATACTACTAAGAAAAGGCATTGTTATATATTTGTATTTCAATTTATTAAACATGCAAGAAGAATAGAAGAATATAAGTTACTAA AAATTTCAGGTATTTCTTTCATTTTAAAGAGAGGCTAAGATGCTTAAGCAAATATTAATTGTGATCACTTCTAAAGCACGGATTCGATGAACACCCTTAC TATCGATGTTGGACATATCCGACATAGATACGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69676; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132770
| Blastp | Chaperone protein DnaJ from Dinoroseobacter with 41.94% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Dinoroseobacter with 41.94% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (Dshi_3570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419813.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |