| Id Trinity | FTRINITY_DN57559_c7_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_132783 |
| Sequence | CAGAAGTAGTCATTTTTCACGGTCAGAAGCAAAAAGAAAGAAAAAAAAACAACACATCCAAAAGCGATTCTATATCTGAATCTCTCTCGGCGTTAGATCA AATTCACAATTCACTCACATCACATAAAAAATGGCGGACTCGTCGGGAACAACGCTTATGGATCTCATAACGGCGGATCCAACCCCGGCCCCAAACGCTT CATCGGCGTCGAGTTCCGCCGTATCTCCGGCGATGACGCCACCAGTTGGTCATCCCTCGGCGCTTGGTAAACCCGCAGGTGAGAAGAAATCGAAGAGAGC CGCATTGATGCAGATCCAGAGCGATACCGTTTCTGCTGCCAAAGCTGCTTTAAAGCCAGTTAGGGCTAATATCATGCCTCAAAGGCAGAAGAAAAAGCCG GTTTCATATTCTCAACTCGCAAGAAGTATTCATGAACTAGCCGCCACTTGTGATCAGAAAAAATCCGTGCGGCAATTAGTGCACAATGTATTTCCAAAAC TAGCTGTGTACAATTCTGTGGATCCTTCACTGGCTCCCTCCCTTCTCATGCTTAATCAGCAGTGTGAAGATAGAAGTGTCCTAAGATATGTCTATTACTA CCTGGCCAGAATATTGTCTGACACTGGTGCCCAAGGTCTGAGCACAGGTGGTGGTATACCCACCCCTAACTGGGATGCTCTAGCTGACATTGATGCAGTT GGAGGTGTTACACGAGCTGATGTTGTGCCACGAATTGTAGAGCAGCTTACTGTAGCAGCCAAAAATTCTGAGTTTGAATTTCATGCACGAAGACTGCAAT CTCTGAAGGCACTTACGTCTGCTCCTTCAACCAACTCTGAAATATTGTCCAGATTGTATGAAGTTGTTTTTGGTATACTAGAGAAGGTTGGTGATAACCC ACAAAAGCGAAAGAAAGGCATTTTTGGGGCTAAAGGTGGTGATAGAGATTCTATCATGCGAAGTAATCTACAATATGGTGCCTTGAGTGCTTTGAGAAGA CTTCCTCTTGATCCTGGAAATTCAGCATTTCTGCATTATGCTGTAAATGGGATTTCCTTTGTTGATCCAGTTGCTGTGAGGCAAGCACTGGAAATTGTTT CTGAGTTAGCTACAAGGGACCCTTATTCTGTTGCAATGGCCTTAGGAAAGCATGTGGAGACTGGAGGGGCTTTACATGATGTTCTCCATTTGCACGATGT TCTTGCTAGAGTTTCTCTTGCCAGGCTGTGCTGTACAATATCAAGAGCTAGAGCTTTAGATGAGAGACCAGACATTAGATCGCAGTTCAATTCAGTGCTC TATCAACTTCTGCTGGATCCCAGTGAAAGAGTCTGTTTTGAGGCAATTTTGTGTGTACTTGGAAAATATGATAACAATGAGAGGACCGAGGAGCGTGCTT CTGGATGGTATCGTTTGACCAGGGAGATTCTCAAGTTACCAGATGCGTCGTCAAAGGAAAGTTCCAAAGATAAATCTCAGAAGACAAAACGCCCACAACC TCTTATAAAACTTGTTTTAAGAAGGTTAGAGAGTTCTTTCCGTAGCTTTTCTAGACCTGTTCTCCATGCAGCTGCTAGAGTTGTGCAGGAGATGGGAAAA AGTCGTGCTGCTGCTTTTTCTGTAGGCTTACAGGATGTAGATGAAGGAGCACATGTCAATACATTTGCCGAGGCTGCAGATTTTAATGATTCAGATGAAA ACGCACATCCTGAAAGTATTTTCTTTCTTTCATTTAATGGTGGTGCATGCTTGCATTGTGCATTTTAAACAAGGATTTTTTTGCCATTTTTTTATTATAG ATTATAGATAATTAGATAAAGATATAGATACAACAACCAAGCCTTTCCCCACTATTTGGGGTCAGCTACATGGATCAAACAATGACATTATATTCTATCA CAAAATCACATATCATGTCTACAGACAAATCGGTGAATTCTAATTCTTTCTTTATAATTCTGCGTATAGTTTTCACATTCTCTCTCTACCTCTGGCGATT GACTCATTCTCCATCTGACTGACTCTCCTTAACGGGGCTTCTATAGGTCTTCTTTGCACATGTCAAACCACCTAAGATGCAATTCAATTTTTTTTTTCCT ACAATAGGTGCTACCCTAACTTTCTCTTTGCATCCACTCCTAATCCTATCCTATCAGGATATAGATATAGATAGTTAGAAAGAATCTTGATCATCAAGTA TTATTGTTTGAGGCATATAAAAAAAGTATCATCGTTTGAGATCTAAAACCTATCTTGGTTTTATAGAGTAGGTCCTTGATAATATAATATTTTTCTTACA TTCTTTTTTATTATTATATCCATGGTGCATGGATTCCATGCTCTTCCATTCCTGGTTTCTTATGTTGTTACTTTGGTTACTATTCTTTCTGGATTGGATT TGGAGTTGTTTAACAGTGTTATATTTGTTTAGTTATTTACTTCTTTTAGAGTTCATGATATCTGAGAAAATGATAAAAAGTGGAGGAGATGATAATGGAA AGTATATATATATATAGTGAGAGAGAGAGAAGAAAAATGTATTTGGAATTTACAAATTGTAAAATGTCATAAGAGTAACTGAATCTGATCTGCTTCAGGT ACGTTCAGTTGTTCTGGACACTGTAAACACTAACAACTATGAACTGGTGACAGTTTTGTTGACACATCAGCAAACTTGCATGATCTGATGTATTACTACA TATTCTAATAATTCTGATTTCTTTTGTAGAAAGAGAGACATACAGAGAGTGGAAAGTTCCTATATAATGGAAACTTCCTCTCGTGATTATGTTAAATAGC ACCGTAGTTTGTCATTCTTGGAGTTGGGGAATACATGACCTGTGTTATCACACTCACAGCGAAAGTTACTTAAGGTCACATTACTGTTATGATAAACTTT ACCAATTCACATCCTATTTGCTCTAGGTGTTGAAGAAGATATTCGTCATTTTCTCGCTGTTTCATATTAGGAACCTTTGGAGTTTCCACATGGTTTGGCT TCTGACGTACTTGTTTATTTATGAAAGTCAAGGGTGTACTTTTCTTTATGAAAGTAAGATAACCTTCTTGCCCAACTCAACATCAGTTTCTAAGAAATAC TTCAGAGCACACATAATTCTAGTGTGGAAATCTGTCTGAGTAAAAGATATGAGAGTTAATTCTAGTGTGGACATCTTTCTAAGTGAAAGATATGAGAGCT TAAGGCAGAATGCAGTGTAGTAGTTACCCCAGAAAATTACATGCTATAGCAAAGAGAGTGGCTGCAATGGAGAAACTTCAAATATTGTTTAACAAACACA TAAATGATAATCCTTGTAGTTTTAAAACGTTATACCATCAGGCAGAGCTAAACTCGATCAGACTCCTCTGAATAAATTCAACAATCATGAATCTCATTGA CCATTGGGTTCAATCATATGACACCTGTTCTTTATCCAAAATTGTATGATATTACCTAACTGAATATGTGGGAACAACGCCTCAATTTTTGATCAGAATT GGGTACAACATTTATACACGGGGTTAGACAAATTAATCCCTAAACTTAATGGATCAGGATCAGCTATGTAAGGAAGCATATATATCAACACCCCCTCAAG TTGGAGCATATATATCATATGCATCTAAGTTGTGACATAAACATGTTATCCTAGGACCCCACAAAGGTTTGGTAAGATATGGGCAAGCTGATTTTGGGAG CAAACACATGGTTATTGTGATGTCATGTATGATATTTTCTCTAATGGAATGACAATCAACCTCAATATGCTTTGTTCTCTCATGAAAGACTGGATTGAAT GAAAGATACAAAGCTGACTGGTCATCATACATTAGCTTCATGGAATCATCTCTGTAGAATTGTAACTCCTAAAGTAAATGCTTAAGCAGATGAGCTCTTC TGTAGTGTAAAGTCATGGCTCGATACTCAGCTTTTGTGCTTGACTTGGAAACAACATTATGCTTTTTACTCTTCCATGAGATAATATTTTGACCTACTAA CACTTAACTACATGTAGTGGATTGTCTATAACTTGGATCTCCTGCCCAATCTGCATTTGAATACTCAACAATGACATTATGTCCTCAATTTGTATAAACA ATTCCTTTTCCGAATGATCCTTTAATGTTGCCAAGGATTTGAACAAGTGCATGTCAATGACTATCACTAGGGGAACTCACAAAGATTGGGGCTATAAAGA GAGAGGAGGAGCTGACAATCAGAATAAGACCAATGACAACGTTAACCGTGACAAGAAAGGTGGCTTTTGCAGCTCACGGGCTAACGAGGACAACCTGCTT TGGATGTGTGTGGCAGCGTGTGAAGAAAGCGACAACAACAATGATGTAGATGTTGATTGGATGACGACGTCTGAGATGGATGGGAGAGAGATCCCAGGGC AGCAAACTTCGACAGCCACAGGGTCTGCGCTTACAAGAACTGGAACCCTAAAAATGAAACAGTGGGAAGCTCGAAGCACAACTTAGAATCCAAGACAAAA GGACAAGGATCAACTAGAGTGCTCCGGATACCAACTTAATTGAACACCTGTGAACAATAGCTGGATATTTGATGAGAATTAGGTACGATATTTATACACG GGGTTAGACAAATCTATCCCTAAATGATGGGGAAATAGATGAAGATATCAGCTATAGGATTCAAGTTGGGTGGATGAATTGGAGAAGTGTTTCAAATGGT ATTTATGATAGAAAGGTACCACTGAAGCTTAAAGCAAATTTTTACTGCACGACTATAGTCCTGTGATGTTGTACGGGATTAATGTTGGGTGGTAAAAATC ATTAGGAAATAAACTTAATATAGTAGAGATGAGAATGTTGTGTCGAATGAGCGGACACACTATGTATTCTTGGATTAGGATGAATGCATTAGAGAGAAAG TTGGAGTAACCTATATTGCAGAAAAGGTGAAATTATTCTGAACATTTGGCGTCATTTGATCCTTGTTGTTGGCCCCACATAGTAGGAAAAGATTTAATGG TTGTTGTATCATTCTTTTTTCTTTCTGTCTTAATTTGGGAGAAAGGGAGGAACATGAAGTTCTAATCTAGGTTTAGAGCCCAGCTTTGATACTTGGTAGA AACAACAAAAGTATGGAAAGAGAGTGGTGAATTCCCATATAATGAGATGCATTGATTTGACTCATGAGTTGGTGATTTATGCTGATGAATTCGGCCGTTT TCATATCTTGCATGCTTATAATCTGTAATGTTACCTAATGCTTTGTTTGATGCAATGAATAGATGAGTGGATTGTTCTACCTTGTATGCTGTACTATTAT CTTAGATTCTTATGTGTACTTAATTGATACTTTGATATAGGCATCCGAAGAACTGCTTCAGTATCGAATGCAAATGCTGGCAGAGATACCATTGCCGGTT TGTTGGCTTCATTGATGGAAGTGGTACGGACAACAGTTGCCTGTGAATGTGTTTATGTGCGAGCCATGGTGATCAAGGCATTGATCTGGATGCAAAGCCC AATTGACTCATTTGATGAGCTAGAATCTATTATTGCTTCAGAACTTTCTGATCCAGCTTGGCCAGCAGCATTGTTAAATGATGTGCTACTCACTCTACAT GCTCGTTTTAAGGCTTCTCCAGATATGGCTGTTACTCTTCTTCAAATTGCAAGAATATTTGCTACTAAAGTTCCCGGAAAAGTTGATGCTGATGTGCTAC AACTGTTGTGGAAGACTTGTCTTGTTGGAGCCGGTCCTGATGGGAAACATAAAGCTTTAGAAGCGGTCACTATTGTTCTTGATCTACCACCTCCACAACC AGGATCAATGCTCGGTATTACTTCAGTGGACAGGGTGTTTGCATCTGACCCAAAGTCTGCTCTTGCATTACAAAAATTAGTCCAAGCAGCAGTATGGTTT CTCGGAGAAAATGCAAACTATGCTGCTTCTGAATATGCCTGGGAATCTGCAACTCCTCCAGGTACTGCATTGATGATGTTAGATGCTGATAAAATGGTAG CTGCTGCTAGTTCTCGTAATCCTACTCTAGCTGGTGCCTTAACTAGGCTCCAGAGGTGTGCATTAGGAGGCAGCTGGGAGATTCGGATTACTGCAGCTCA GGCTCTTACAACAATGGCAATCAGATCTGGGGAGCCTTTCAGGTTACAGATTTATGAGTTTCTTCACACTTTGGCACAAGGTGGTCTTCAGACACAATTC TCAGATATGCATCTTAGTAATGGAGAAGATCAAGGAGCTAGCGGCACAGGCCTTGGAGTTTTACTAAGTCCTATGATAAATGTTCTTGATGAAATGTATA GAGCACAAGATGATTTGATCAAGGAAATACGCATTCATGACAATGCTAAAAAAGAATGGACGGATGATGAGCTGAAGAAACTATATGAAACCCATGAAAG GTTGCTAGACCTTGTTTCATTGTTTTGTTATGTTCCAAGAGCCAAGTATCTACCTTTGGGCCCTACAAGTGCGAAACTCATTGACATCTATCGTTCACGG CACAATATTAGTGCATCAACCGGTTTGAGTGATCCAGCTGTTGCAACCGGCATATCTGATCTCCTATATGAATCTAAACCAGCACCTGCTAAGCTGGATA CACTCGACGATGACCTAGTAAATGCTTGGGCAGCAAACCTTGGCGATGATGGTTTATGGGGAAACAATGCACCAGCAATGAATAGGGTAAATGAGTTTCT AGCAGGTGATGGAATAGATGCTCCAGAAGTTGATGAAGAGAATATGATCTCTAGGCCATCAGTTAGCTATGATGATATGTGGGCAAAAACACTTTTAGAA TCTTCAGAACTAGAGGAAGATGATGCAAGGTCAATGGGATCATCTTCTCCAGATTCAACCGGATCTGTTGAAACTTCAATATCATCCCACTTCGGTGGAA TGAGCTACCCGTCACTGTTCAGTTCACGGCCATCCGCTACGGACAAGGCTGCAAGCCGAGGTAGTGGTCCCTCTATTTACGAGGGTCTTGGTTCTCCTAT AAGAGAGGAGCCTCCACCATACTCATCCCCTGTCACTCAAAGATATGGATCATTTGAGAACCCTCTCGCAGGGAATGGATCTCAAAGTTTTGAATCTCAA GATGACGAACGAGTTTCATCTGGTAACCCACAATTTGGATCTGCGCTTTATGACTTCACAGCAGGAGGAGACGATGAATTGAGTCTAACGGCCGGAGAAG AAGTTGAGATTGAGTATGAAGTAGATGGCTGGTTTTATGTTAAGAAGAAACGTCCCGGCAGGGATGGCAAGATGGCTGGATTGGTCCCTGTTTTATATGT TAATCAGTCTTAATCTTTCATGAAACAAGTAAATGTCTGGTAATATCCCTGTCGTGATGCAAAGAGATTTTCCTTTTTACTCATTATATCTTGTGCGTTG CTCTGCTTTTTGTCAAGTTTGTGTATTTTAGAAGTGTCATTTTCCATAGCAATTGCTTGTGAGTATAGTAATTCATCTACTTATTTTGTTTACTAATCAT GATTTTTGGATGTACTGTCTATTCGAAATACTTGAATGAGTATGCATGTATATGGAGTTCTATATATCAAGTTAAAGGTTCAGATTTTCCATGTCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69681; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132783
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.73% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020239528.1) |
| Pfam | Variant SH3 domain (PF14604.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |