| Id Trinity | FTRINITY_DN57560_c0_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_130570 |
| Sequence | TGATGATCCAATCCCTTCGAACACTACAAGAAAAGTATTTGTTAGCCACACTAATGGCATGTGTCAAAATCAATCCACAAGCCCATACACTTGTCACTTT AATTGAGCGGTGGCAAATAAAAAGCATAAAAGCTCTTCATTTCTTTATTTTTCTTTCTTTCTTCTCCCTCATTACTTCATTTTTCTTTCTCCTCCACCAT TTCTTCATCTTTCTTTCTCCTTCAAGTAGAAAGATGAGTGCAGCAATATCTTTTTTAAGTATTTTTCATTATCAATACTTTAGTGCATTAGGTTTCTATC GGTTATAAGCGTATAATATTACTTGAGGAGAAATCTTTGTTTTGGTAGTTCTAATGTTATTCTTTTTTGTGGGAGAAATCTTTGCATACTATTTCTTTCA TTAATATTATTTTTTAACTTGTTGTATTGAAACTGTACCCCATTCAATCTTCATTTATTTTCTCCAAAGAAGAGGATTAGTGCATTTGTTATCATATAAC TTCGACCATTATGCTAATGAATGAAAATAAAATAGTTTTTACCTCCAATCAATTGGATGAAACTAGGTATAAGATTCTACTTGAGGTTCCTATAATTTTT GGTCAATGAATCAGGCCAAGATAACTAACATTGCACAATTAATATTGTGCAATCATTCAATTCAATTGTGGAAAGGTTGCAGTGGATTGTTGATTGCTGA CCCTTTTGTTTTACCCCTATAAAATGAATTAAGCAGACTAATGTGAAAAACTGGATGGACTTTTGCAATTTATGATCTGCAGGTGGTGTTTGTTTTCATT GATTCATAGATTGCAAAAACATATAACAATATGTAAAGCTTAAGGAAGAGAAGGAGGATGAAGCGGTGAAAGGGGGAGAGCTAGTGTTCTGTGGTGCCAC GTGTTGGGATATGATTGGTCGTAAAAAAGGCATCGAAGGTAACTTGGTCTCCCCCACGCGCCTCCGTCCTCTCATCGGCGTCGATATTCGCTACGTCGTC TCCGGTTGCGCATCGTGTCATTGCGTTGCATTGGATGTTGAAGGGCGTTGCTATACATGGGGCCGTAACGATAAGGGGCAACTGGGTCATGGAGATACCA TTCAGCGCGATAGGCCAACTGTGGTGTCTGGACTTTCTAAATACAAGATTCTCAAAGCTGGATCAGGGAGGAGTCATACAGTAGTTGTTACAGATGATGG AAATTCCCTAGCCTTTGGATGGAACAAGCATGAACAGCTCGGTGTAGGCTCTGTGCGAAATGAAATTGAATCATCTCCTGTTCGCTGTCTTGTGTCTGAA GTAACATATACTACTTGTGGTGGTGACTTCACCGTGTGGTTATCTTCTGTTGAAGGATCTTCTATACTGACTGCTGGGCTTCCACAGTATGGACAGCTTG GACATGGAACAGATAATGAGTATAATTCTAAAGACGGTTCTGTAAAGTTGGTTTATGAAGCCCAGCCACGTCCTCGGGCAATTGCATCTCTTGCTGCTGA AACTATTGTCAAAGTGGCATGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTGTGTCTACACGTGGGGTTTCGGTGGTTATGGAAGACTAGGG CATAGGGAGCAGAAGGACGAGTGGGCCCCTCGCCGTGTTGATGTCTTCCAGAATAGAAATGTTTTGCCTCCTGATGCAATTATTTCAGCTGGTTCTGTGA ATTCTGCATGTACTGCTGCTGGAGGGCAGTTGTATATGTGGGGCAAATTAAAGAACAATGGTGATGACTGGATGTATCCTAAGCCCCTAATGGATTTAAG GTTGTGCTTTATTTCATGGTTTGAATAATAATTCCAAGCACATATCTCCGGCCTAATTATTTTTCTCTTTATTGGGTCTTGCTAACGAGTGCCCTAAAGC GACTCTTCAAGGAATCAAGAAAAAAGTTGTGTCAAGGGAAGCTGGGTATAATGTGTTTCAATGTATTTAATACATCATTTCCCATATACACTTTCTCATT GATTCCTTAAAGAGTGCCCTTAGGGCGCTTGTTAGCATCCTCCTTTTTAATTTGTTGGTTTTGATAAAATTATTCCATATTGACTTTGGTAAATAGTGGC TGGAACTTACGATGCATGGATTCAGGCGGTATGCACCATTTTGTTGGGGCTGATTCCTCATGCATAAGCTGGGGCCAAGCTCAGAATGGAGAGCTGGGAT ATGGACCTATGGGACAAAAGTCTTCGGCGGTACCCAAAAAGGTGGATATACTTGAGGGCATGCATATTATGAGGTATTAGTAATCGGTGGTTCACCTATT TCTATCTAATCATGCTTCCTTCTGTGGATGTTGCATATTCTACATTCCACCTTAGAAGTTAAACATTTTTTCATTAGTCATGGCTACCTCTCTACAGGTT TAACTTATTTACACCCAAAACACTTGTTTTTTAGATTAGAGTAGCCACCCTTAAAATTTATTTTATCATTACACTTATGGCCTTATGAGCAATGATTGAA GTTAAACAGGTAAGTGATGGATGTAGTTTTTGAAACACATGGTTGAGTGTGTAATTAAATCAAACTCTAAGAAAGTATGGTTTGAAGCAAGAAATTTATA ATAAAACAGAATCTGTTCTTATTTTCAAACAGAATATGTGATACCTTGTAATATTCTAAATTTCTGTTCTTATTTTCAAACAGTGTTGCTTGTGGTATGG CTCATTCCATGGTTATTGTTGATAGAACAAATGTTGCTGATCGACTTGAGCAGCTTGATGTATATGATGGAAAAGCTATTGGTGAAGCAAATGAGCCTGC AGCCAAAGCTGTAGTGCCTAAGCAGACTGCAAAAAAGGGTGCAAAAGGAGTTGACAATTCAAAGAAGAGGAAAAATGCAAAAGATTCATCTGACGAGGAA GAGGATGAGGATACTGAAGAGAGTGACAATAGTGACGAGGACGAAGTAAATGGCGAGATTGAGGTAAAAAGGGCAGGTAGAGGCCGAGGCAGGGCTTCAG CATCCAAAAATAGCAGCTCCGGCCGAGGCCGAGGACGCGGCCGCACTCCAGCTGCCCCTCCAGTGAAATCATCTGGCAAGAGAGGAAGACCTCGAAAGTC GTCATGACCAGAGACTGACTTGGTTTGTTGGAAATTTTGTTCTCAATACCGAAAGATTTGTAACATGTAATTCATTGGCCGGTGATTTTACCTAGCATTT AAAATACTGTCCTGCCAAGTATTTAATGCAAATTTCTTAAGAACATGTTAAATTTGCAGACAATTGAGATGTAGAGGGTGGAAATGCCCGTTTATTTAAA TTTGTGTAAGTTGAAAACCTTTTATTGCCTCAGTTATCACCTGTCTCTGGATATGCTTCTATTCTACTAATGTACTGAATTGATGACTTTGATGTTTAGG AAATGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69686; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_130570
| Blastp | Protein RCC2 from Homo with 36.45% of identity |
|---|---|
| Blastx | Protein RCC2 from Homo with 36.68% of identity |
| Eggnog | regulator of chromosome condensation(COG5184) |
| Kegg | Link to kegg annotations (55920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415441.1) |
| Pfam | Regulator of chromosome condensation (RCC1) repeat (PF00415.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |