Ll_transcript_130547

• Id Trinity: FTRINITY_DN57560_c0_g1_i5
• Name Transcript: Ll_transcript_130547
• Sequence: TGATGATCCAATCCCTTCGAACACTACAAGAAAAGTATTTGTTAGCCACACTAATGGCATGTGTCAAAATCAATCCACAAGCCCATACACTTGTCACTTT AATTGAGCGGTGGCAAATAAAAAGCATAAAAGCTCTTCATTTCTTTATTTTTCTTTCTTTCTTCTCCCTCATTACTTCATTTTTCTTTCTCCTCCACCAT TTCTTCATCTTTCTTTCTCCTTCAAGTAGAAAGATGAGTGCAGCAATATCTTTTTTAAGTATTTTTCATTATCAATACTTTAGTGCATTAGGTTTCTATC GGTTATAAGCGTATAATATTACTTGAGGAGAAATCTTTGTTTTGGTAGTTCTAATGTTATTCTTTTTTGTGGGAGAAATCTTTGCATACTATTTCTTTCA TTAATATTATTTTTTAACTTGTTGTATTGAAACTGTACCCCATTCAATCTTCATTTATTTTCTCCAAAGAAGAGGATTAGTGCATTTGTTATCATATAAC TTCGACCATTATGCTAATGAATGAAAATAAAATAGTTTTTACCTCCAATCAATTGGATGAAACTAGGTATAAGATTCTACTTGAGGTTCCTATAATTTTT GGTCAATGAATCAGGCCAAGATAACTAACATTGCACAATTAATATTGTGCAATCATTCAATTCAATTGTGGAAAGGTTGCAGTGGATTGTTGATTGCTGA CCCTTTTGTTTTACCCCTATAAAATGAATTAAGCAGACTAATGTGAAAAACTGGATGGACTTTTGCAATTTATGATCTGCAGGTGGTGTTTGTTTTCATT GATTCATAGATTGCAAAAACATATAACAATATGTAAAGCTTAAGGAAGAGAAGGAGGATGAAGCGGTGAAAGGGGGAGAGCTAGTGTTCTGTGGTGCCAC GTGTTGGGATATGATTGGTCGTAAAAAAGGCATCGAAGGTAACTTGGTCTCCCCCACGCGCCTCCGTCCTCTCATCGGCGTCGATATTCGCTATGTCGTC TCCGGTTGCGGTCAGTTACAGTTGCAATTTCAGTTTCATTTTCTTCTTATTTAGTATAATGTGTGTTGTTGTTGTTGTTGCTGTGAATGATGCAGCATCT TGTCATTGCGTTGCATTGGATGTTGAAGGGCGTTGCTATACATGGGGCCGTAACGATAAGGGGCAACTGGGTCATGGAGATACCGTTCAGCGTGATAGGC CGACTGTGGTGTCTGAACTTTCAAAGTACAAAATTGTCAAAGCTGGAGCAGGGAGGAGTCATACAGTGGTTGTTACAGAGGATGGAAATGCCCTGGCCTT TGGATGGAACAAACATGGACAGCTTGGTTCAGGTTCTGCGCGAAATGAAATTGAGTCAACTCCCGTTCGCTGTCTCGTGTCTGATGTAACATACACTACT TGTGGTGGTGACTTCACTGTGTGGTTATCTTCCATTGAAGGATCTTCTATACTAACTGCGGGACTTCCACAGTATGGACAGCTTGGGCATGGAACAGATA ATGAGTATAATTCCAAAGACGGCTCTGTGAAGTTGGTTTATGAGGCCCAGCCACGTCCCCGAGCAATTGCTTCTCTTGCTGGGGAAAATATTGTCAAAGT GGCATGTGGAACAAATCACACAGTGGCGGTCGATAAGAATGGTTATGTCTACACGTGGGGTTTCGGTGGTTATGGAAGACTAGGGCACAGAGAGCAGAAG GATGAGTGGGCCCCACGTCGTGTTGATGTTTTCCAGAATAGAAATGTTTTACCTCCTGATGCAATAATTTCAGCTGGTTCTGTGAGTTCTGCATGTACTG CAGCTGGAGGGCAGTTGTATATGTGGGGCAAATTAAAGAACAATGGTGATGACTGGATGTATCCTAAGCCTCTAATGGATTTAAGTGGTTGGAATATACG ATGCATGGATTCAGGCGGTATGCACCATTTTGTTGGGGCTGATTCCTCATGCATAAGCTGGGGCCAAGCTCAGAATGGAGAGCTGGGATATGGACCTATG GGACAAAAGTCATCAGCTCTACCTAAAAAAGTGGATATACTTGAGGGCATGCATGTTATGAGTGTTGCTTGTGGTATGGCCCACTCCATGGTTATTGTGG ACAGAACAAATGTTGCTGAACGACTTGACCAGCTTGATGTATATGATGGAAAAGCTTTTGGTGAAGGGAATGCACCTGCAACCGAAACTCCAGTGCCTAA ACAGACTGCAAAAAAGGGTGCAAAAGAAGCCAACAATTCAAAGAAGAGGAGAAAGGCAAAAGATTCATCGGAAGAGGATGAGGAAGAGGATGAAGATGTC GAAGAGAGTGACAATAGTGATGAGGATCAAGCCAATGGCGAGGCTAAGGTAAAAAGGGCAGGTAGAGGCCGAGGTAAGGCATCAACATCCAAAAAGTCAG GTACCGACGGAAAAGGTTCTGGCCGTGGGCGTGGTCGCCCTCCAGTAAGAAATAAGAGCAGTTCTAAGTCATCTCCAGTGAAATCAACTGGCAAGAGAGG AAGACCTCGCAAGTCGTCATGACATGGTTTGTTGTTGGAAACTTTGTTCTCTATACCTATAGAGATTGTAACATTTTTAATCCATTGGCCGGTGATGTTA ACTAGTATTTTAGTGTTATTAAAAATCTTCTCCCTCAATTTAATGCATTTTTTTGGATAACATGTTTTGTGTAACTGTGTAAGGGAAAACTTCCATTGCC TCACTCTTTGGATATGCCTCTAAAAGATCTTACTAATGTACTGAACTGTTGACTCAATATTTGTTGAAGCTGGAGGATGATTAAATTTATTATTTTAATC TATTATGGAGTATATTCG
• Tissue: flowers
• Gene name: LI_gene_69686;
• Additional information: details;

Expression of Ll_transcript_130547

FPKM

• FPAB: 0.3
• FPNAB: 0.3
• LF1: 0.8
• LF2: 0
• LF3: 0
• LF4: 0
• UF1: 0
• UF2: 0.3
• UF3: 0
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_130547

• Blastp: Protein RCC2 from Mus with 37.96% of identity
• Blastx: Protein RCC2 from Homo with 37.8% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (108911)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417033.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;