Id Trinity | FTRINITY_DN57563_c0_g1_i12 |
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Name Transcript | Ll_transcript_131737 |
Sequence | CCTTTCTTGACAGAGTTCTCCATCCGTCAAAAGTTAAACGTGAAGCGTAGGAAATATAATAAGAGAGGTCACAAGAACGAAGAGTCAATTGAAAAACAAG ACGTTAAAGATTTGTGCCGTTGGATCATTACATCATTTCCCTTCAATCTAGGGTTCTTCGAATATCCTTTTCGTCTTTCACTTCTTCAATCTAAGGTCAA TTAAATCCTCTATGACGATAGCTGATTCAGATTTCCCTATGGACAATGGAGCAAGTTGCTTGCCGATTCCACCTGAGGAAGAGAATCGTATCGTGTCTGA CTTGCTCCAGGAATCGGAGCTTAACTTGAAAGAAGGCAACCTGTGCTTTGTTATTTCTAACAGGTGGTTTTCAAGTTGGCAGATGTATGCTGGGCCTTGT ATTGGTATATTCTCAACTGACAAGCAATCTTCTAACAGCGAGCATGCAAATGATGTCCATTCAGAGATTGCAGCTAGACCTGGGCCAATTGATAACTCTG ATATTATTTCAAGTGAAATTAATTGTGATGACAATAGTTTAGATATTCTCCGAGCGTTGGAAGAGGGGACAGACTATGTTTTAGTTCCCCAAGAAGTGTG GGAAAGACTGTTGGAATGGTACAAAGGTGGACCCGCACTACCAAGGAAGTTGATTTCTCAGGGTGTTGGACAGAAGCAATACAGTGTTGAGGTTTACCCG CTTACTCTGAAGGTGACGGATGCCAGAGATAACAGTAAATCAATTGTAAAATTAAGCAAAAAGGCTACCTTAACTGAGCTTTATGAGCTGGTATGCAAAA TTAAAGGAGTTGAGGAGAAAAAGGCTCATATCTGGGATTACTTCAATTTGGAAAAAAGTACATTGCTGACTGTCTCAGACCAGACATTGGAGGATGCAAG CTTGACAATGGACCAAGATATTCTCCTTGAAGTATCACTTGATACTTTTTCTCATTCTGGCATGGATTCGGTGGGAAATGAACTTGCGTTGATACCATTA GAACCTCCAACGTCATCTGTGTCAATTGCAGGGGGACCTACCATGTCAAATGGTCACTCAACTGGGTCTAGTTTTAATTTGTGTCAGGGAAGTTCTGCAG GTTCATCACTGACTAGCTTGGATGATAAAAATGTTAATGTCTCCAGAGGAGAAAGGGGTGGCTTGGCAGGACTGCAGAACTTGGGAAATACCTGCTTCAT GAATAGTGCTCTTCAATGCTTAGCCCACACTCCGCCGCTTGTTGAATATTTCTTACAAGATTACAGTGAGGATATCAACATGGACAATCCTTTAGGAATG CATGTATATGATCATTTGTGTTGGCTTTTATTTTATTTTTTCTTTATATTGAAGACAATGTGCATTAACTTTCAAGTTGTATCATGTGTCTGATATGCAG GGTGAGTTAGCACTTGCATTTGGTGACTTGTTGAGGAAACTGTGGTCCTCAGGGCGTACTGCTATTCCACCTCGTGTATTCAAGGGCAAACTGGCCCGAT TTGCTCCTCAGTTCAGTGGTTATAACCAGCATGATTCACAAGAACTGCTTGCCTTTTTATTGGATGGGCTGCATGAAGATTTGAATCGGGTGAAACAAAA GCCTTACATTGAAATGAAGGACTCGGATAGTAGGCCGGATGAGGAAGTCGCATCTGAGTGTTGGAAAAATCATATGGCTCGGAATGATTCATTGATCGTT GATGTTTGCCAAGGTCAATACAAGTCAACTCTGGTTTGTCCAGTATGTGGCAAAATTTCAATCACTTTCGATCCCTTCATGTATTTATCATTACCGATGC CTTCCACTGTAATAAGGACAATGACAGTGACTGTCTTTTATGGTGATGGGAGTGGTCTTCCCATGCCATTCACTGTGAACGTTCTGAAGCATGGTTGCTG TAGAGATCTTTGCACCGCATTGGGGACTGCATGCTGCTTGAAGAGTGATGAAATGCTTTTGCTTGCAGAGGTTTATGATCATAAAATTTTTCGATATCTA GAGAATCCCTTGGAACCACTGTCTTCAATAAAGGACGAGGAACATATTGTTGCCTATCGCCTCAAAAAAGGACCCTGGAAAACGAAACTAGAAATAATGC ATAGGGATAATATCAAGAGTGGAGATAGGAAGCTCTTTGGATCTCCCTTGGTTACTTATTTGGTAGAAGACCCTCAATTTGGAGCCAACATTGAGGCATC TGTACATAAAATATTGTCACCTTTAAGAAAAGCATATTCTTCGACCAAGTCTCATGATGGGAAGGAAGATGGTTTCATTTCCGCTGGCAGTGATGAGCAA TCGAACATCTCCAGTGCTGAATGTGAGTCAAGGACCCTGACAACTGGCTGCATCGAGCAAGAGGGGACATCCTATGGGGAGTCGTCTTTCAAACTTTTTT TGACTAATGAAAGCTGTTTGAGCTATGATACCATTGAGAAGGATTCTCTTATAAAGCCCAGTCGACATATAAGAGTATTCCTTGACTGGACTGGCAGTGA ACATGCATTATATGATGCCAGCTTCCTGAGAGATCTCCCTGAAGTTCACAAGACTGGATTCACAGTGAAGAAAACCCGGCAAGAAGCTATTTCTTTGTTT TCTTGCTTGGAGGCATTCTTGACTGATGAACCTCTAGGACCCGATGACATGTGGTACTGCCCTGGATGCAAGGAACACAGACAAGCTACGAAGAAGCTAG ATTTATGGAAATTGCCGGAGATCCTTGTTTTTCACTTAAAACGATTCTCATACAGCAGATACCTGAAAAACAAACTTGACACTTTCGTGAACTTTCCCAT TCACAACCTTGATTTGACCAAGTATGTTAAAACTGAGGATGGACAGTCCTACGTGTATGACCTTTATGCAATCAGCAACCATTATGGTGGTCTTGGTGGT GGGCATTACACTGCGTATGCTAAGATGGCGGATGACAATAAATGGTACCATTTTGATGATAGTCATGTCAGTCCTGTCACTGAAGCTGAAATTAAATCTT CAGCTGCATATGTATTGTTTTATCAGAGAAGAAGCAAAGCGCAGATGGAAGGAGAATCTCAGTTTCATACAGGTTCTCATAGACAGTGATAGGGCATTTT TGTTATATTTTATACCTGGATTATATGTTAATTACAATGTGGAGCTTAGGTCCTGGATAGTTTATGGTACTCTACAAAGGAAAACAAGCTAAAAGTTGAA GACAAAATGTTACTATGTCGGAACAGTAATTAAGCCGATGTTCAGGCGAGGCTCTGGAAACCATTTTCATTAGGAGTCTCTGTTATTATTACATGAATTG TACCATTTTTTGACCCAGAAATTTTGGCAGCCTATGTACTTGTTTAGATATTTGTTATTTAATTGGAGATTAAAACAATAATGAACCTATCACTGGTGTT GTGGTAGTTGTTAGTATCCATGTTATGCTAATGATTGTGAAAGAAGTGTACCCATTTTCCATTATGTCAGGATTCTGGAATGTAATATCATGCAACAATA ACAAAATGTGTTGAAGAGACTTTAAATGGCGGCTGATTATATCTGCTTGTTTTTTTGTTGTCTATTTTAAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_69723; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_131737
Blastp | Ubiquitin carboxyl-terminal hydrolase 10 from Arabidopsis with 66.55% of identity |
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Blastx | Ubiquitin carboxyl-terminal hydrolase 10 from Arabidopsis with 66.55% of identity |
Eggnog | ubiquitin carboxyl-terminal hydrolase(COG5560) |
Kegg | Link to kegg annotations (AT4G10570) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431269.1) |
Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |