| Id Trinity | FTRINITY_DN57565_c3_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_133039 |
| Sequence | CTACTCTTCACTCCTCGATCCACAACAAGGAGGTAGTACTATTCTTTGTTTTCCTTTGATTCTCTCTCTGTCTCTCGTTTTCTGGTTTGATCTGATGTCA CAGCTAATGGGTTTTCAATTTTCTTTCTGGGTTTCTCATTTTGATGCCTTATGAACTTCAAAATTTTCATTTTTTTACGAAAATGAATGAGCTTCCTCTT TAGTTATTACATGATGTACTTCCTAGCTACCTACCTGCAACTCATTTTTTCACTGTTCTCTTAGTTACCCACCAACCCATTTTGTTTTACACCGAGTTCA CATTCTCAATTACTACTTTCCTTTTATGATTATTGGTAGTTGGTACATGTCCATTTCAAAACTAGCCCGTGATGGATCTGATGCGGTGAATTAATTAATG TTCTGTCCTCTCATCATTCCCTTGTTTTTTAATCTCTCCACAGAAACAAAAAAAGTGTTTTTTTATGCTGATTTGGTTTTATAGTTTCTTTGTTCTGTTA ATAAGAAGTTTGCAATCTATGAATTACCTCAAGTGGAAGCAGTTTTTTCTAATGATGTTGTTGAAATAACACAGTCTTATTGGTTTTGTAGGTTCTTAAT TGCTCATAAAGTATCAGCATTCTTTGTGGAACTGATTTGATTGGTTAAAGAATGTCAAGGCCTCTTCAGAGAGGGGTAACTGGGGTAAGGACTCCTGATT CCAAATCGAAAGATAAATCAGAAAAGGAAGATTGGGATAATAGGAGAGCTTCTTCAGATCACAGTCCTCTATCCCCTTTCCGGTTACTTTTTGGAGATAA TAATTCTCATTCAAAATATGGAATTAATGAAAATGGCTTTGCTTCTGATCCCTTCATTGTTGGCAACCCGAGAAGTCGGCTTAAATTGATGTTGCTGTTT TTGAAGTTTAGTTTAGTGTTTATAGTTGTTCTTGCTCTCACTGGATCCTTTTGGTGGACGATGTCGATTTCTGCCTCATCAAGAGGTCACATTTACCATG GTTATAGAAGACTCCAAGAGAAACTTGTATCGGACTTGGTTGACATTAGCGAGTTTAGTCGTGGTACAGCGAAGTTTAAAGAATTGGAATCCTGTTCGGT GGAGCATGAAAATTTTGTCCCTTGCTTTAATGTTTCTGAGAATCTAGCTCTGGGTAATTCTGATGGCAATGAGTTTGATCGGCAGTGCGGCCGCGAGCTC AGGCAAAATTGTTTGGTTCTTCCGCCGGTGAGTTACAAAATTCCTCTTCGGTGGCCTACTGGAAGAGATGTCATCTGGATTGCAAATGTCAAAATCACTG CAGAAGAGGTTCTTTCTTCTGGAACCTTAACCAAGAGGATGATGATGCTGGATGAAGAGCAAATTTCCTTTCGTTCAGCCTCTCATATGTTTGATGGCAT TGAAGACTACTCACATCAAATTGCAGAAATGATGGGACTTAGAAATGAATCGTACTTCATACAAGCTGGGGTACAAACAATACTAGACATTGGTTGTGGC TACGGTAGCTTTGGAGCGCACCTCTTTCACAGTCAACTTTTAACTATGTGCATTGCCAACTACGAGCCTTCTGGCAGTCAAGTTCAGCTCACTCTCGAGA GGGGTCTTCCTGCAATGATTGCTTCTTTCACTTCAAAACAGTTACCATATCCATCTCTCTCCTTTGATATGTTACATTGTGCATGGTGTGGCATTGATTG GGACCAGAAAGGTATCTTCTCAATTTTAATCTGTTACTTTCTGTTGGGTCTGCATACTTCAATTTTATTCTGTACTTTTTCGACAACAATTTTTTATTTA TGAATAGACATACCAAGGAAAAATTGGGATAATTCACAAAGCTTCTATATTAAATAGAGTCCTTTCAGTCAAGCTTACAAGGACCTGCCGGCTATTGCAT TTTGGTCTAAGAAATAATTTTTTATCATTGTAATTATCCATTATCAGGTTCTGTAAAGTATACTTTAATTTCCACACATCTGAGTTATGTGGACTGGCTA CATCATATGGTATTGTTATTTATCTTTGAGCCTTAGACATTTAACATCATTCTAGCAGAATATCCTGAGGTTTACTTGAGCCTTAGTATTGTTTATTTTT TATACTTGGGGAAGTATCCAACAATCTGCAGTTAACTTGTAAAAACTAATTCCGTTATTTTTAGTTTCCCCCGCAAGTCTCCCCCGCAAGTCGATGAAGA CTCGCCCTCAAATCCTTAGTGCCTTCTTCATCATAATAAAGAACAAGATCAGAAACTTTCGATGTTTCTAAAACCTGTGTGAAGGCGTTGAAGCTAATCC TTCAGAGTTCAAATTGCCTTTATTCTATATTCTCATTATGTCCCTTTTTTATGTTTGAACTTGGAATCTGAAAAATTAGATCTGGCTTCAGAACCATTAA TTTGACTTATGCAGAATTTTACTCAATATTTAAGCCACTGTTGATCTTATTAACATTCCTATTACATGGTGTAGATGGCGTTCTCTTGATTGAAGCTGAT AGACTTTTAAAACCTGGAGGATACTTTGTCTGGACATCACCACTTATAAAGTCACGTAACAAGGGGGATCAGAAAAGGTGGAACTTTGTACACGATTTTA CCGAAAATCTTTGCTGGGAAATGTTGTCACAGCAAGATGCAACTGTTGTATGGAAGAAAACTAGTAAAAAGAGTTGCTATAGTTCAAGGTAATGCTGCCA TACATATTTTTACTAAAATTTATTTCATTTTGTGCATCCGGGGAAGCGTATTCTAGTAAATAGATTCTACCATGTATATACAACTTTCTTACTACATAAA AATTAACATGTTCCTGATTCTTAGCATTACCTGTTTTCACTACCAGAAAGTCTAGTTCTGCCCCTCCTTTATGTGGTAAAGGTCATGATGTGGAGACTCC ATATTATCGAGAACTTCAAAACTGCATAGGAGGAATGCATAGCAGCCGCTGGATTCCAATTGAAAAAAGGGGAAACTGGCCTTCTCGAGCTAACTTGAAC AAAAACGAGCTCGCAGTCTATGGGTTGCAGTCTGATGAATTTGCTGAAGACTCTGAAAGCTGGAGAACAGCAGTCCGTAATTACTGGTCACTCCTGTCTC CTTTGATATTTTCGGATCATCCAAAGAGGCCCGGTGAAGAGGACCCTCCACCACCTTACAACATGTTCAGAAATGTGCTAGACATGAATGCTCATTTTGG TGGTTTTAATTCTGCCTTGCTGCAAGCTAGGAAGTCTGCCTGGGTGATGAATGTCGTCCCAATAAGCGGGCTCAACTATCTTCCCCTGATCCATGACAGA GGATTCATAGGGGTTTTGCATGATTGGTATTTTAATCTCCTTTCTCTTTTTCTTATTTCATAATGTTATCATTCTCTTCTTCTATCAATTTGTTTTGTGT GGCAGAATATGAATTCACAGGCATGTACTAAATTTTTCTTCCATTTTTTAACCTAGTGTTTTCTAAAAATTGATGGTTTGATCTAGTTCTAACTGTTTTT TAGTGGAGGTGTATAATATTCACACTTTGTGAATACTCAACTTTTAAGTTTGGATAGACATGAAAGAATTCACATCTGAGATTTGTTATGAATCGTGTAA TGAAGTTATAACTTATAACTAGTTAATAAGTAATGTCGATAGTAAAGTATTGCAGCATAAATTACAGACACCCCCATGAACTTATTTACCAAATGGATTG GTTACAGTTGTTTTGTTAAGAAACAATAGAATTACTAAATTACATAAAATCAAGCATCTTATCATTTGCTCAAGAAAGATTTAGACTGTTTACCAGTCGC ATGATGCATATAACATTTATTGTCCTATTACCTCTGGCTTAGAATCGATAAAATTTTGTGAAGAATGGCTGCTAGGCCCTATGCACATTATAGTTATCTT ATAATTATGATTTTTGGTGGCATCTAGGTGTGAGGCCTTTCCAACATATCCTAGAACCTATGACTTGGTGCATGCAGCTGGACTTCTATCCCTTGAAACT TCTCAGCAGCGCAGGTGCACAATGCTTGATATGTTCATCGAAATTGATAGGGTACTTCGCCCAGAGGTATGTAAACTCAGTATGAACCTTGTTTCTGAGA TAAGTGACTTAAAATGATGGAGGGTGCATTCTTAAAAAACATAAAGATATAATAACTTTAAGCAACAAAAAAGGTTGAGCAGATTTGAGTATTAATATAT GAATATAAAGTTTCTGGAATATTGTAGATGACTAAAAGAAGTTGGAAATTTTAGCTACCAGTACTACATGACTGAATGTAACTAGATATGCATTAATTTG TGAATTGCATGATAAGTTCTATGCATGCATTTTAAATTTGCGTTCGATTTTTCATGGTCGGTCTCCTTAATCCCGATGAAGGTAGCTCTCTAGACCATCT TTTTAAACCAAAACTGTCTCATGATTCTGATGTTTGACCCCTTTAACTTGTTTAAGGAATTCTGATATGCTTTTACATTTGACATTCTTGCAGGGTTGGA TTATAATTCGAGATACAATTTCTTTAATAGAATCAGCTAGAGCTCTAATAACACAGCTGAAATGGGAAGCAAGAGTGATAGAAATTGAAAGTGACAATGA TCAGAGACTCCTGATCAGCCAGAAACCTTTCTATAAGAAACAGTCAAGCTAAATCAGTTGAAGGCCTGAAGAAATTAGACCATAATATTCATATATTCAT TACAATCATGTTCATTTATTTATCATCATAAAGTTTAGCCAATAGAAAGTGAAGATTGGAAATTTTTGGACATGAAGGAAGCTGAAAAAAACAATAGAGG AAACAGTGTATCCTGGTAAATGATACTACCACATATCCTATGTAACTGTAAGGTGTACATGGGGTCATATAATTAGTAATTACCAAAGGAGCAAATGAGA AAGTATAGTGTTAAATTCACTTTTCAATGTGATGTCTTTATTAGAGATACACAAATACAATACTAAGATTGGAATATCATGATAGAATAAGTTATTGATA TTTGCTATGTTGTATAAAATGATCATCCCTTTATTGCCTCTTGTTATAGAAATATTTTCTTCCATAATTTTATAAGTTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69737; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_133039
| Blastp | Probable pectin methyltransferase QUA2 from Arabidopsis with 66.12% of identity |
|---|---|
| Blastx | Probable pectin methyltransferase QUA2 from Arabidopsis with 66.39% of identity |
| Eggnog | pectin methyltransferase(ENOG410Y9W6) |
| Kegg | Link to kegg annotations (AT1G78240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456261.1) |
| Pfam | Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |