| Id Trinity | FTRINITY_DN57572_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_132927 |
| Sequence | AAGAAACTGTGAACAGAACTACACTTGCAGGCACCACACAAATATATTGTTGCTTGGGTGGCACATAACTCTAACAATAATTACTGCCCTTACCAATCCA AGTATCTGTAAGTGGAGTTTCAGTGTCAGAAACCTATCCCAGTAGGAGTAGCTACTAGTGTGGGCTTTTTCACCAAGATCTCCCTTTTTTCTTCTGAAAC CTCTTCACCAAAAAACACATCACTAAAAACCAAATTCATAGATCATAGTTAGTTTTCACTTTACATCAACTCAAAAAAATATCAATCTCAACCACTGTTC ACATTATTCCCTCAATAAAATCTCTGCATTCAATAACATATCATCCCATCTTATTAAAGATAAAAACATCATAACCTTTTTATTCAAAACCTTAGTCTCA ACCCTTGTTTGTTCCAATGAACATGTTAGGCCTAAGAGACCTAGTTTTCATAGCTCCCAACCCTTCTTCATTGAACCACCAACAAGGCCAACAACAACAA CACATATCAGGTGAACACCATGGCAACATTCCTTTGAATTCATCAGGTGCTCTCAGTGTTGGTCTTGGTATTTTTCCACTCTTAACTATACCACAACCAC AACAACCTCATATGAATGATGTTCATCAAGATTGTGGTGGCAACAACAACAACAACTATTGGAACCTTAAGATGTGTCCAGAAGTGATGAATAATTCCGG TAGAAAAGGAGTTATGATCAACATGGAAGAAAACGAAAGCAACAAGCACATGCTGGAGGGTGAAGAAAATGGAGATAATATCTATGGTGGGGGTGAGTTC AGGGTGTGTCAAGATTGTGGTAACAGGGCAAAGAAAGATTGCAGCTTTAGAAGATGCAGGACTTGTTGCAAGGGACGTGGATATGATTGCAGCACTCATG TGAAAAGTACATGGGTTCCAGCATCTAGGAGGAGGGACCGGGATATGGTGGTGGTTGGTGGTGGTGATGGTGGTGGTGGTGGTGCTTCTTCTTCTGGTGT TAAGAGGCCAAGAGCTTTAGGGTCATCATCACAAAATGCTGCTACTAACTCTCATAGTTCTACCTCTAATGCTACCACAACAAAGAGCTTTGATACTAGC TCTTATCACCAAGATCCTGGTTTCAAACAATCTTTACCAGGTCATGTATGTGCACCTGCTGTGTTTAGGTGCCATAGAATGGCTGCTATTGGCAATGGTG AAGATGAACTTGCCTACTTAGCCACGGTTCAAATTAGAGGCCATGTTTTCAGGGGCTTTCTGTATGACCATGGCGTTGATGAGAAAAATGAGACTCCTTA TGTTTCTGTATTGCAACTTGGAAACAATGGTAGTGGAAAGAATAATAGGGAATGTTCTTCTTCTGCAATTGGGGTTCCAACTAGTGCCTACCCTGCTTCT GCATGTTGAGATTGCTTACAGGTACAAAATATACTTAATTCATTGTTACATTCTGAGACCCATTGATTGTTATATTCTTAAGTCATTATTAAAAATATCA ATGAGAAAAGCACTATGGATTTACAAATTTTTCTATGTTGATTCTTGTGTTAGCTTAGAAATAGTGAAAATGGTTTACCTAGCTGTTTATTGCTAATCAA AAGCTTAGACTCTCTTGTATATGTGAAATAAGTGAAATGGTAGAGTACTAATAAGCAGAACAAAAAATAAGGAAAAGAGAGAAAGAAATAGAATTAGGAG CTTGGCCCCTTGATATTCACAAGTGTCTAGTTATCCATTTGTGGCTGCATCTGCAAATGAAGGGTAAAAAGAGCACTCTACCTAGTTACCAATATCATAG GTATTCCTTTTAGGCATTTGTTTATTTCATACGATATGTTAGTTACTTTAAAAATCTCACTTTCAATGGAGGGAAATGTTTCTTGAACATCAAAATAGGA ATATCTTACAATGTTTTATTTATTTTTTAATGTATACATGTTAGAAAGAGATTATATCACTAAGAGATATAAATAAATGTATTTGATATCATTTTTAATG CCCAAATGCTGGAGTACTTCCATAAGAGGATGACAACTAGAAAAGCATTGTTTGTGCCTTTTTTCAATGTCCATTGAAAGTGTGTGTTTCATTCACCTTT GTTACATTTATGCTTCTATTTGAGCAAGTGTTCCATGCTTTACTGAGGTGGTGCTTAGGGGCATGCATTGCTTTGTCTACATGATTCACATCTACCATTC CACATCAACTTTTATTTTAGTAGGCTTATGCTTTCACTTTTGACATTTTTATCTCAATGTATGAGCACATTGTTCTCCTCCAACCCAAAAAGTAAATAAA AAAAGTAAACAACTCTGTTTATCCTAGCAAGGCTATAATCAAATAACTTGTAACATGGGCTACTAGGTAACTATTGAAGTGCTTTCTTTGCCTAACATCT TACCTGGTTTTGATAAAGACAGCCACCAATTAGATTCACCATTTGTTTGGTGGGATCTTTAGACTCACCTCATATGCACACACTGAAATGTCTTCAGTTA TATGTTCCTTTTTCTTGCATTCAAAGATTTAACCTAGTTGTCACTCTCCCATGTTGTGTTAGAGATATGTAGATATTACAAAAGCTACAGGTCAGTTATC TATTATTTCTTTTCTTATTATATAGGCTCTGCCACGTTTCCCAACACCTTACATATAAGATTGTTGGAGAACTTTGTACTCCAAAGTCCTAAGTCCTAAC ATGCTATCATAATTTCCTAATTTAGCAACCAACTTTGCCATGGTGCATTATTCTTTTCCTAGTTTATAGTTATGAGGGTGAAATATCTTCAAAAGAAAAG AGTGAAAGACCATAGAAAGTGAAGTAAGAATGCAAAAGACAGTTAGTGGGGGCAAGGGAATCCTAAAATAAAAGTCTAAAATACACACTATAATTTGTAT ATATTGCTATTGTTCTCATAGTTGCTTTATTCTTCTGATTTAGAACAGAATTATTTTACTTTGTAATAAAGCTTCTATATGCCAATGACAGGTGATGGAT CAGTTTTATGACCTCCTGAAGGCAGTTCATTCTGCAGCTTTGCAGGGAAAACTGATCATATATGCTAAATAGTCTTATATTATTATTGTTATGATGTGAA TTTCTTCACTGTCCCTTAAAATATTTCTGTTCTACTTTGGTCATAAAAAATTAAAAAAACTTCAAAATAATCCCAAAAACATTAAATGAGTCAAATTAAC CTTTTTACTTGACCCATCATAGAAATTATTTTGACTCGTATTTATGATTTTTAGTATTAGTTTGTATTTCTTATTTTTTCGGATCAAAATGGTACACTAA AATTTTGTTTTCACTAGAATTTCTTTCCATATGATGTTATGTGCATACATAAAAGAAAGAACCTAGTTTCAAGTTCTTGCAAAAGAATGGAGAACATTTG TGTGGCAGGATTATATATTCAATGCTTAATACTTTGATCTCAACATTCATGGGGTTCATAGTGGTCCTAGAATCATATGAAAAGTATACAATTATGCTAT CCGGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69790; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132927
| Blastp | Protein LATERAL ROOT PRIMORDIUM 1 from Arabidopsis with 40.55% of identity |
|---|---|
| Blastx | Protein LATERAL ROOT PRIMORDIUM 1 from Arabidopsis with 47.72% of identity |
| Eggnog | Domain of unknown function (DUF702)(ENOG4111TEK) |
| Kegg | Link to kegg annotations (AT5G12330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449844.1) |
| Pfam | Domain of unknown function (DUF702) (PF05142.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |