| Id Trinity | FTRINITY_DN57579_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_130660 |
| Sequence | TGAGATCAGAACGTAACCCGCGGGTGAGGTAAAGGAGAATGCGAAAAGAGCGTGTTGGTGCTATTTGAATCACCGTTTGAGAATGAACAAAACCCTCTCT CCCTGAAAACCCAATCCCTTGGCGGCTGCGAGAACCTTTTTTTTCTCTCTCTCTCCTCTCTATTTATCTCTTTCTCGCTCCTATTAGGGTTTCGATTTGG GTCTAAAACCCTTTCGATTTGTGGTTTTCGGATTTCGATTTTGGGCTCTGCTGTTTCTCTTATCTGAAGAATAAGATCTCGTGATTGATTTCAACATGAC TACCGTTGCTACTGCCGCTGATCAAGCAACTGATTTGCTGCAAAACTTGACATTAGACACTAAGCCCAAGTCTCTGGAAATTCCTGAGCCAACCAAGAAG GTCTCTGGCAACCAACATGGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGATCCCACCTTATGATCGGTCTCTAACACCTCTCTTACAAGATTTTA TGGATCCTGCCATGTATTACTTTCCAAGTGGATACCCATCTCCTGCCTATTATTATAGTGGTTATGATGGGACTGGTAATGAGTGGGAAGATTATTCTAG ATTTATGAATCCTGAAGGAGTGGATGTGACTTCTGGACTTTATGGGGATAATGGATCTATGCTGTATCACCATGGATATGGATATGCACCCTATGCACCC TATTCTCCAGCTGGGTCTCCTGTTCCCACCATAGGAAATGATGGACAACTGTATGGGCCACAACACTATCAGTATCCTCAATATTTCCAGCCATTGACCC CAACTAGTGGTGGGTCTTTTGCACCAACTGCAACGGTTCCTCCTCAGAGGGAGATCGCTACTTCTGTAGCTGCTGCTGATCAGAAACCTCTGCCTGTGGA AACAGCTAATGGGAACTCTAATGGTGTTACAAATGGCGGAAACACAAAAGGTCGTGGTCCTACTTCAGGTTATCAGGATCCTAGATTTGTTTTTGATGGG GTACGCTCACCTGTCCATTGGGTAGATGCCCCACTATTTTCAGATGTTCAGCAAAAACCTGCAAGCAGCTCATCAATCACCTCCACAGTACCAGGTGGCA ATAACAGTACTGCATCAAGGAACCAGACCTTCCGCCCTAATTCTCAATTTATGGGTTTACAACACCCAAGACCAATTCCTGCCCTGGGAGCAAACCCTGG CTTCATAAACAGGATGTATCCTAATAAGTTGTATGGTCAGTATGGGAACCCAATTAGATCGGGCATGGGTTATGGAGCACATGGATATGATTCTCGCACA AATGGACGGGCTTGGTTAGCTGTTGACAATAAATACAAAACTAGAGGACGTAGTGGTGGTTACTTTGGCTATGGCAATGATAACGTGGATGGTTTGAATG AACTGAACAGGGGACCTAGAGCCAAAGGCAATAAGAACCAAAAAGGGTTTACTCCAACTACTATTGCAGTCAAAGGGCAGAATTTGCCTGCAATTCTAAG CATTGGTGAGGAGAAAGATAAGACCATTTCCACTCCAGACCTCAATCAATATAACAAAGCTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTTATC ATCAAGTCTTATAGCGAGGATGATATCCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACACAAAATGGTAACAAGAAACTGGATGCTGCATATCAGG ATGCCCAGCAGAAACCTGGTGGCAGCCCTGTGTTCCTGTTTTTCTCGGTTAATACTAGTGGACAATTTGTTGGTGTCGCCGAGATGATTGGTCCAGTTGA TTTTAACAAGAGTCTTGAGTACTGGCAGCAAGACAAGTGGAATGGTTGCTTTCCTCTTAAGTGGCACATTGTTAAAGATGTTCCTAACAATTTGTTGAGG CACATTACTTTGGAAAACAATGAGAATAAGCCTGTGACTAACAGTAGGGATACCCAAGAGGTATTTTTGGAGCAAGGTTTGAAACTGATCAAAATTTTTA AGGAGTACGCCAGCAAGACATGCATCTTGGATGATTTTGGATTCTACGAGGCACGTCAGAAGACAATTTTGGAGAAGAAAGCTAAGCAACAATACCCAAA GCAGGCAAGGCATCCTTTGAGTATTTCATTCTTATTTGCTTATGTTCGGAAGTTATATGAAATTTTTTGATCTGTGCTTAAGATATATTTTATATTTTAA TATGCTTCTCCCATTGCAGGTATGGGAAGGAAAGCCCACTGATGAGAAAACAGAGGTGAACGATGAAGTTAAAGCTCAAAATCCTGAAGTTGCCACAGAA TTGCTCAAGAACTTGAGTCTAGCTGAGAAGGATAGTGATGGCCACAAACATTCTGAGACTGGATCTGTTTCTAAAACTGGAGATGCCCCAAAGGGTGCTA AACCAGTTGTATCTGAGACTAAACCATAGCAAATGGTTGCTAAGCTCTGTTCGATGATGGCGGACCCAATCTCGTGTCAGTTGGTTGATACCCGAGCAGT TGGTTCTGCCTTATCGAATCTGCCTGGCCTTCTCTTGTCTGAAGATGATAGGTGAAGTGGTGATATGATAAAGATGTGTATATTTGAGATTGGCAGGGTG GGAGGTAGATCATAGAATGCTAACCCCTTTGAGTTGGGTTTTGTTTACAGTGGTTAGCTCCTAATAGGTTTTCTTTACTGCCTAGGGTTTTGGGTTTTAG GTTCTCTGCTTAAAGATCTGCTTATATCTTTTTCTTATGTGTGGACTTCTTTTCTCTTAGTTCATTTTCTTTTTATCTGTTTCCTTGGTCGTTTTCTGCC ATGTAAAACCCAGATCTCCTTGGCTGCAGAGTAGCTTCCTTCTGTTACTTTCAACCGAAGTAGAAGCAAGGTGGGAAATAGTGAAAAATATACTTGGCTT TATAAGTTTTCTTTCCCTTATAAGTTTAACTTTTATTCTCTGTTTAGACAATCTATTATGTTAATTGGGGGTTTTCCGGCTAGAAGGTTCCCCTTTTATT TTTGTGAAGGTACCTTTTATTTTTGCTTAGTTCATGGGTCCATTTTAATACTTGTTTATATTAAATGTTTTGGAAACAACTCTATTTTTCAAATTATTAA CCATTCTTGCAACCTAAAGTTGTCGCAGTATTTTGGGGTTTAACATTTTGCAAAAAATTGTTTATTACGTGTTAAAATGAATAACAATTATCACTATATA TATAGCTTTACTAATTGGTTCTCCACTTCTGCTTTTACATCGTTCTATCATATTACGCGATTATTAGTTAATGCGTGTGTTTGGTTAAAATGTTTTATTT CATATTTTCAAGTGTTCCTTTAAACAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69848; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_130660
| Blastp | YTH domain-containing family protein 2 from Bos with 55.98% of identity |
|---|---|
| Blastx | YTH domain-containing family protein 2 from Mus with 55.98% of identity |
| Eggnog | YTH domain family(ENOG410YABQ) |
| Kegg | Link to kegg annotations (541050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463716.1) |
| Pfam | YT521-B-like domain (PF04146.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |