| Id Trinity | FTRINITY_DN57588_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_131920 |
| Sequence | CAACTTTACTTCCTTCGTTCTACTTCATTCCCTGTGTTACGTACTTCCTTTTGATCCGGTCTGGGTGGACGGACCTGCTGGATCCTGCTACGTCAACAAG TTCAGGCACGGGCTCCGTGAATCAGCCGCCAGAGGGAATGCCTGTTCCTCCCGCTAATCCTGTCGCTCCCGGGGAAGCGGATATTCGACCTGTCGTAGCC TACCCCTATCAGGAAGATTAAATGATAGGGGGACAGAGTGTTCTAGATATAAGGACACGACTCTTAAGATCCAAGGCCCAACCATCTGCCGAGGAAATTA ACAAGGCCCATATTAACGCCCAAGACCGCTTCGAAGTCAAGGTGGATATTATCCAGCAGATGGCAGTCCTTGATTCGGAACCAAGTGGCGATTGGACGGG ACGGGGAGCGCGGGCCCTGGACAATCCCCGTGCGGTCAGAACCGGGGGGGAACCTTCCTTAATAGAGCTCTATCGCCTTAGGGACGAGCTCCATGAGGGA GGAGTACAATCCGATGCCTTTTTAAGGTAAGGCTAAAGGATAAGATTTTCACCAGAGTAGATAATCTGGATGAGAACTCCACTACTTAATGGTGCTACTG GATGCTTTTGATCAATAGAACAGGAACAGGAACAGGAACAGGAAGAGGAGGAAAAAAAAGCTTATGATGAGCATCTATTTGAGTCGATCATTTCCAAGAT CTAATTCAAGTTTATTCTTATGTAGTGGAAAGGCCTTACAATCTGAAGTTTTACGCTTAGGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCGC CATAATTTGTATGCAAGATGAGCTTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAAGAAGGTGGGATTCCTGGATCTAGTGGCCGGTGAATCA CTGATCAAAAAGAAGATTTTGGAGAGATTATTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCAGCCGCCAGGTTTAATGATTTGGTGG GATCCACAGATGTAGTGGCTGGTGAACCGCTTCTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCGAACGAA TACAAAGGTAAAAGGCTTTATTATTAAAAAAGTAAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTATTCCATTCCGTTGTTACAAAAAA AGGAAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGGATGAATATTGTGGTGTTCTAACAGCGGCAGATCAAAGAATAACTTG ATGAGCGAAATCTGCTGTAAAAAAAAAATAAAAGAGCAGTTTTTTTAAATTCCGAAGCGAAACCTAGCGTCTCCTGATAACACTCTATCACCTTAATCCA TTCTTTTGTTGAGGGTCTGGCACTTATGACAGGCCGCTCTGTCATTGTCTGATTTTTGGTTGTCTGATCACACTCGAAATTATGTATCTACTTATCGTCT TTTTGCCCCTTATCGGTAGTTCCGTAGCAGGTTTTTTCGGACGTTTTATAGGATCAGAAGGAACCGCTATAATGACCACTACGTGCGTTTCATTCTCTTC GATCTTATCTTTGATTGCTTTTTATGAAGTCGCACTGGGAGCTAGTGCTTGCTATCTAAGAATTGCTCCATGGATCTCATCGGAAATGTTTGATGCTTCT TGGGGCTTCTTGTTCGATAGCCTGACCGTAGTGATGTTAATTGTGGTTACATTCATAAGTAGCTTGGTCCATCTTTATTCCATTTCATATATGTCTGAGG ATCCGCATAGCCCTCGATTTATGTGTTATTTATCCATTTTTACTTTTTTTATGCTAATGTTGGTGACTGGAGATAACTTTCTTCAATTATTCCTGGGATG GGAGGGAGTAGGTCTTGCTTCATATTTGTTAATTCATTTCTGGTTTACACGACTTCAGGCAGATAAAGCAGCTATAAAAGCTATGCTTGTCAATCGAGTA GGTGATTTTGGATTAGCTCTTGGGATTTTGGGTTGTTTTACTCTCTTTCAAACAGTAGACTTTTCAACCATTTTTGCTTGTGCTAGTGTCCCCAGAAATT CTTGGATTTTTTGCAATATGAGATTGAATGCCATAACTCTTATTTGTATTTTACTTTTTATTGGTGCTGTTGGGAAATCTGCACAGATAGGATTGCATAC TTGGTTACCCGATGCTATGGAGGGTCCCACTCCAGTATCCGCTTTGATTCATGCAGCTACTATGGTCACAGCTGGCGTTTTCATGATAGCAAGGTGCTCC CCTTTATTTGAATACTCACCTACGGCTTTGATTGTTATTACTTTTGCAGGAGCTATGACGTCATTCCTTGCGGCAACCACTGGAATCTTACAGAACGATC TAAAGAGGGTCATAGCTTATTCAACTTGCAGTCAATTAGGCTATATGATCTTTGCTTGCGGCATCTCTAACTATTCGGTTAGCGTCTTTCACTTAATGAA TCACGCCTTTTTCAAAGCATTACTCTTCCTGAGTGCAGGTTCGGTGATTCATGCCATGTCGGATGAGCAAGATATGCGGAAGATGGGGGGGCTTGCCTCC TCGTTCCCTTTTACCTATGCCATGATGCTCATGGGCAGCTTATCTCTAATTGGATTTCCTTTTCTAACTGGATTTTATTCCAAAGATGTGATATTAGAGC TCGCTTACACTAAGTATACCATCAGTGGGAATTTTGCTTTCTGGTTGGGAAGTCTCTCTGTCCTTTTCACTTCTTATTACTCTTTTCGTTTACTTTTTCT AACATTTCTAGTACCAACTAATTCATTCGGGCGAGACATCTTACGATGTCATGATGCGCCCATTCCTATGGCCATTCCTTTAATACTTCTGGCTCTCGGG AGTCTCTTTGTAGGATACTTGGCCAAAGATATGATGATTGGTTTAGGTACAAATTTTTGGGCCAATTCCCTCTTCGTACTACCAAAAAATGAGATTCTTG CCGAATCCGAGTTTGCTGCTCCAACCATTATCAAACTAATACCTATTCTGTTTAGTACTTTAGGTGCTTTTGTTGCGTATAATGTAAATCTCGTAGCGGA TCAATTCCAACGAGCCTTTCAAACGAGTACTTTTAGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTATA GTCAGATCGTTCCTGCGTTTCGGATATGAAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCTTATGGTATCTCGTACACATTCC GACGATTGGCCGAGCGGATAAGTAAACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTCTGGTGGGGGCGGCTC CTCCGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCAAAGCAGTAGTAGGGGCGTTCAGACCGGAGCTTTTTGTAGTGCTAGC AGGAATGCAAGTGAATGAATCCCATCCCCTAGCGAGTGAAGTGCTTACGCCCCTTTAGATTAGAGATAGGGGCGCGCTAGCGCTTTAATAATAATAAATA ATAGAAAAGGGGGCTGAGAAAAGCTTGCTGTCTACTTCTCGAGCCTTCACTGCCCCGTTCTTTAACTTCCCTTCTTTAGTCCGTCCACGAGGCTGTAAAA AGAGAGAGAGGGGCGGCTATATAGCGGGAGTCGTTTCGGTTGTATGCCACGAGGTCCCTATGGACAAGGGGACAAGTGAATCATCGCTTTTGGGCGCAGG CAGCCCTCTACCATCCATCCCATTGCATTCCATCGTCTCGTATTGTACTGTACCGTACCAGACCAGATACATCTATTGAGTGAGAGAAAGGTAGCTTCTC TATATATATTCTTAAAATTTTATATTTATAGGGATCCCCAGATTCCCGTCACTACGGATTTTTTTTCTCTACCTAACTACATGGTAGTGGTCTAGGGAGC GCAATTGCTAGAGCACGGGAGAATGAAGAGTAATGATTTCAGCAAGAGCAGCCGGACGGACTACTATAGTGAGTCCAGTGACTACTAGAGTAGAGTTGAG TCAAAAGGTATGGTATAGCTGCCTTTCCGAGCGAGCCTCTGGGATCTCCTGTAAACCCCCATGATGTGGTAAAGTAAAGGGAGGATATTAGGGGAAGCAG TTAGTGGAGATTCCCCTGCAGAGAGCCGGATGAGGGGAGACCTTCACGTCCGGTTCGGAGGGCGGGGATATCCCGACCCTACTATCATTATGCCTTTGCA ATGTTACTTGGTTTAACTCTATTTGTGACCTTTTTTTGTATGTGGGACTCTCTATCTTCTTGGGTAGATAATCGATCGTCTTTAATTTTTATAGTAAGTA GTTTTTATAATTATAAGTCAAGTCAATAATAATAAGAATCGAACTGGAGGAGCGAAAAGCCAGGATGGCTTGGTAAGCAAGCGACCTGTTATGTAGGCGC CAACTCCCATTTCTTTCTCTTCTTTCTTTTTTAATGACAGTTCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69940; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_131920
| Blastp | Ribosomal protein S1, mitochondrial from Marchantia with 35.12% of identity |
|---|---|
| Blastx | NADH-ubiquinone oxidoreductase chain 5 from Arabidopsis with 97.58% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002281) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (YP_009237614.1) |
| Pfam | - |
| Rfam | Intron_gpII (RF00029) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |