| Id Trinity | FTRINITY_DN57589_c0_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_132574 |
| Sequence | GAGAGATTCTTGTTGGGAACATTTATCTGTCTTAAATTTGAAGGAAGTGGTGCTAAATAATATAATAAATTAAAAAAAATGCCCACAAATTAAATATTAA TATATTATCAATCATTACTTCCCTACAAATAATATAATATTAATACTCAATATTATATAACTCTCTTTTCCTTCTCTCAATTTTCTTTCACCACAACCAT TCTCTCTTCTTTCTTCTTTATTCAATGACCAACATCAAAAAACTCTTCGCCGGAATCAAAGATTCCGGCAAGAACAAAAAGAAGCTCCTCTTATCTCTCT TTGTTACTCTTCTTCTTGTTACCACCGTTGTTGCCATTGTTGCCGGAGTTAACTCTCACAAGAACTCAAACAGCAACAACAACAGTGATTCCTCTTCACT CTCACTCTCTCACCACTCTCACACTATAATCAAAAGTGCATGCAGTTCCACATTCTACCCTGAACTATGCTTCTCAGTAATATCATCTGAACCAGGCGTT ACTCACAAAGTTTCCACCCACAAAGATGTCATAGAATTGTCCTTAAACATTACCACAAGAGCCGTTGAACACAACTTCTTCATAGTGGAGAATCTCATAA AAACACAAAAGGGTCTCACTGAGAGAGAAAAAACCGCACTCCATGATTGCTTAGAGAACATAGATGAAACACTTGATGAACTGAAACAAGCTCATGAGGA TCTTCAATTTTACCCTAACAAGAAGACACTGTATCAGCATGCTGATGATCTTAAAACTGTTATAAGTTCTGCCATTACTAACCAAATTACTTGCTTGGAT GGGTTCTCTCATGAAGATGCTGATAAGAAGGTGAGGAAGGTTCTGGAAGAAGGGCAGGTTCATGTGGAACACTTGTGCAGTAATGCTTTGGCTATGACAA AGAATATGACTGATAAGGACATAGCTAACTATGAGCAGAAGATGATGGCCGTCGGAAAGAGCAACAGGAAGCTGTTGGAGGAGGAGGACGGCGAGGTTAA GTGGCCGGAGTGGATTTCTACCGGGGATAGAAAGCTTTTGCAGGCAAGTTCTGTTATTAAAATATCAAATTTAAAATATACTAGTGCAATATTATATATG ACAATGTGCATATGTTTAATTTTCACTCGCATTTTTTTTAATAATAATGACCTTTGGATGGCCCAAAACTCTCTTTTATACTCAAATTGAATAAAATCTT TTATCCTGAGTTCTATGCTCGGTGTGATTAGGGATTGAGAAAAGTATTAACATTGTATCTGCTCTTATTAAATCGATATATCCACTAGTTTGGATAGATA ATTGGCAACCTTATAGTATTTTCTATCGCAGTGTTAATTTGATAGTATGTTACTATTTTTTTATAGTAGGACTCGAACACCCAATTGTCGGCATTCCGGT CTTTAGACCATCATCTTCACCATTTGACCAGCTATGATGTGTAAGAAACATATTTGTTTTGCAGGCTGCAACAGTGAAGGCAGACGTGGTGGTGGCAGAA GACGGTAGTGGGGACTTCAAGACGGTGTCGGCGGCGGTGGCTGCTGCACCTGAGAAGAGCAAGAAGAGGTTTGTGATTAGGATTAAAGCTGGGGTTTACA GAGAGAACGTGGAAGTGGGAAAGAAGAAGACAAATATCATGTTCTTGGGAGATAGTAGAACAAATACTATTATCACAGGTACCAGAAATGTTATTGATGG TAGCACAACCTTCCACTCTGCCACTGTCGCCATAGTTGGTGAACAATTTCTAGCTAGAGATATAACCTTTGAAAACACAGCTGGTCCCTCAAAGCACCAA GCTGTGGCCCTAAGAGTTGGTGCTGACTTCTCAGCCTTCTATAATTGTGACATATTAGCATACCAAGACACTCTCTATGTCCACAAAAATAGACAATTCT TCATAAACTGCCTCATAGCAGGAACAGTAGATTTCATCTTTGGTAATTCAGCTGTAGTGTTCCAAGATTGTGATATCCATGCTAGGCTTCCTGATTCAGG CCAAAAGAACATGGTCACAGCACAAGGAAGAGTTGATCCTAACCAAAACACTGGCATTGTAATACAAAAATGTAGGATTGGTGCAACCCAAGATTTGGAC CCTGTGAAGAAGAATTTCCCTACATATCTTGGGAGGCCTTGGAAGGAGTATTCTAGAACTGTGATTATGCAAACAACAATTAGTGATGTGATTGAACCTG TTGGGTGGCATGAGTGGAATGGAAACTTTGCTTTGGACACTTTGGTTTATAGGGAGTATCAGAATACTGGGCCTGGTGCTGGAACTTCAAATAGGGTTGC ATGGAAAGGGTTTAAGGTTATTACTAGTGATGCTGAGGCCCGGGCTTTTACTACTGAAAGCTTCATTGCAGGTTCTACTTGGTTGGGCTCTACGGGCTTC CCTTTCTCACTTGAGCTGTAACTGTGACGGACTCAAAAAATTTACCATGTGTTGTGTTGTATGCTTAAATTTATATCATTCAAAATATAATATTTTTTTC ATAATGCATACTTAAATTAGGAGAGTCCAACATAAAATTTCATGATTATTGTTCACGATCTTTCACATTTTAGAGACATTGAATAATTTTCTCATTTTCA GTACTACCAATAACATATTTCTATATATTCATTTGAGAGAAGAAAAAAAATCAACGATTGGAGTGATATAGTATTAAAATTAACTATAAAAACTTGTATA TCTATGAATATATATCATGCTTCTTGGTCTCCAGAAGGTTTATAAAGAGGATAGTCATTACCCACACTGCAAAAAATGCACTGTCAAATTAAAAGTCAAA ACAAGATTGGATAGAAAGGGAAGAAAAGGTGCATAGTTAATATAATGTCTCGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69951; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132574
| Blastp | Pectinesterase/pectinesterase inhibitor U1 from Lycopersicon with 58.48% of identity |
|---|---|
| Blastx | Pectinesterase 3 from Citrus with 78.82% of identity |
| Eggnog | pectinesterase(COG4677) |
| Kegg | Link to kegg annotations (544016) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455536.1) |
| Pfam | Plant invertase/pectin methylesterase inhibitor (PF04043.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |