Id Trinity | FTRINITY_DN57598_c3_g3_i6 |
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Name Transcript | Ll_transcript_130921 |
Sequence | GTTCTAGTAATTCAAGTAATTCACCTGGTTTTGTGGATTTTCAAGATGTTTGGTGTGGCCCTGGAATTGGGTTTTCAACTGATGCAGCATCTGTTGATTA TGTTGTTCCAAAGAAGAATGTGTCTTCAAGAGGGAAAATTGATGTTGAGAAGATAACTCACAGAGAGTGTTCATCTTATTTGGGAAGGCGTCCTGTCACT CCAGAAACCATCTCGTTTCTGGACACTGATCCAGACATTTTCGCAGCTTCGGATTCCTTTGGACCCGCGGCTCCAATCTATCGCCATATTCAAGATCCTT CATCTGATGATTCATCTGATGGTTTTACTGAGATTTTGCTTCAAGGTGGTCTACTAATGGGGGGACGATTAACTAGGCACGACCGGTTCCGACGCTTGAG ACTTGATATTGATAACATGTCATATGAGCAATTGCTTGATCTCGGTGAAAGAATCGGTTATGTGAACGCTGGACTTAAAGAAGATGAGATGGGACGCAAC ATAAGGAAGACTAAGTTTAAATTTTCACACGATGCATCAAAGAATCAAGTAGATAGAAAGTGCACCATTTGTCAGGAAGAGTATGAAGCAGATGATGAAC TGGGGAAGCTGAATTGCAAACATAGCTATCATGTTCGGTGTATAAAACAATGGGTTGCGCAGAAAAATTTCTGTCCAGTTTGCAAGCAACAAGTCATGGC TCGACACTGAGTGTCACAATCCTGATGTGTTTTTTGGGACTACTTATTCTCATCCTTACGTTGGTGCATAGATTTTCAGATAAAATACAAGTTTAAGATT TTTTCGGTTTTTGCTATGTTTTTCTCAGCCTCCTTTGCTAGGAATCTGGAACACATGTTATTGGGTAAAGGTTTCATAATTGGATGAGAACTTGGCATAT TATAAACATGAGTTGGCCTTGCCTTTGAGCAAGTAATCATTTTTATGTAGTTTGTGGTAGTGTTTATATTTCTGATGCTTATCATCTGCCCCCATTTCGT GTTTATGCTAATTGTCTGTGTTGCAAAAACTCAGCTTGAGCATTAAGAACACCCCATTAAGGAGCAAGGTCCATACCCGATCTCAAAGATGAGGTTCTCA CCTCATGATGCATGGGGATGAGAGTACATCTGCTGTCCTACATGTTGTGCCATGTTGTGCCACTGGATGTACCACGAGCCCATGATTGATTGAAAAATGT TTTTTAAATTAAAAAAATAATAATTTATTATTTTTTTGACTAATCACAGCTGATGATACATGTAGTGGGACATGCAATGTCAAAGAATCAATTTGGTCCC TCAAGCTTTTCACTTGTATCAATTTAGTTCTTAAAAACTGTGAAACAAAGATATTAAATTTTGGTCAAATTAATCATTTTTAGTATTATAACTAATTCTT TCTTACTTTAGTTCCTACCAATGATTATATTGGTCCATATTCATGATACTAGTTTGAACTGAATATTCAGTTTTCTTTTGAGTGTGGGATGGCACCACTT GTATAATATTAAAGTTTGAATGAAATATCTATATGTTTTTTTTAATATAGAATTTGGGTGGGGATTTATTTACTCTAAGAGTAAGTTTTTTAAACTTAAG AGTAAGTTTTTTAAACTTATTCCACATCTTATCCATAAATTTTAGGGAAATCCAATGGTTTAAATTAGTGAGTAGATCTAAATCATTAGAACTCATTAGA ATTGATGGTTAAGATGTAAAGTAAATTTAAAAATCTTACTCATTAGAATAAGTGGATCCCGGCTCATAAAATTTTATACATACTAATACAGGTTAAAGTG GACAAGGTGGGTTATTTGAGTCATGTCTTTAGAAACTATGGTCCTATTCCAGGCACATCATTTTCTAGCTGTATTTGATGAATCAAACTATTTCAATTTT TTATGTCAATAGTGGTGGCTAACAACTAGGGCCCCTTATTGTTTTGAATTTGCATTGAGGTCACATTATTGCTAGATGGCACCCATTTTGCTGATAATTA TGGCATTTTTGTGGTACAGAAAAAAAGTTGCACAAGTTCATTGTTTTCTTACATTTGTAGCACTTTTTTCCATGGGAAAAAATGGTAATCAAATATTGAA AAAAATAGGGAGAAGAAAGAATACTACAAACTACAGAGAATTTGTATGGGTCCTAGAGAGCGCTATTAATAGAGACATGAGTCCAATATACACAAATTTT CCATTCTAATACTAGATAATATAGGATATCTTAGAAAATCTACACAAGAATCTTCATCGTACCGAATAAAAGCAGCTTGGCATAAAATCTAAAACTATCT GAACTCCCTCCCATACTCTCACCATGTCTTCTTCTTCTTCTTCTTACTATCTATATGATGTGTTTTTGAGTTTCAGAGGTGAAGACACTCGCAATAACTT CACTTCTTCTCTCTACTCAGCTCTCACTGATCTCAACATCAATACCTTCATGGACAAGAATCTTGATAAAGGAACAAAGGTGAAACCTGAATTATATAGA GCAATAGAAGGATCTAGAATATCCATGGTTGTTTTCTCACCAAGGTATGCGGGATCAAGATGGTGCCTTGATGAACTTGTGAAGATTATGGAGTGTCATA GAAGTAATGGTCAACTTGTTGTTCCAGTCTTCTATAACGTTGACCCTGCACATGTACGCCATCAGATTGGTGACTTTGGTGATTCTTACACACAGCTTCT AAGGAAACAGAGATGGGTCAATCATGCAAATGTCTTGGCTGAATGGAAGACAGCACTCACTGATGCTGCTAATTTTGTTGGTTGGCCTGTTAAATCCGAC AAGTAAATGATATGTTCTCCTACTTCTTTTGTTTTTATTTTCTGATACGTGGTTCTCTTTGGTACGGATGCATAGTACTTAGTCTTTTGCTCATTTCAAA TACCAACATGTTAGGTTTGAATCAACTTTGACTTCACCATAGGAGAAATACCCTAAGATAAAATTATTTTTTGTTTATTGTAACCTATTCATGTAAGTGA GCACACATCATCAATCACCTTTTTTTCTTTGTTATTTCTTTAACTTAGATTGTAGGTGGAAATCTGGCTTGTTCCTTATAAGAGACCAATTTGCAAAGAA ACACGAATTGGTATCCAAGAACCGATTCACAGTTCTCTACCAAATTGAGATAATTGTGTTTCAATGATTTTCCCTTACCTGCATTTGTCGCGGACCTAGA ATTGAAACCTTGCATATGTATGATATTTTGTGCTCATTTTAATTATTGCAGTTACAATGTCATCAAGCTTATTGTTCAGGATATTTACCGAAGGTTAGAC AGCACATCCTTACCTATTACAGATTTTCCAGTTGGGTTAGAATCTCGTGCCCGTGTTGTGATTGAGCTTTTGAAAGGACAATCAAGCGCAGTTCGTGTAA TAGGGATATGGGGAATGGGAGGATCTGGTAAAACAACCTTAGCCAAAGTTATCTTCAACCAAATTCATAGGGATTTTGTAGGTACAAGTTTCCTTGCTAA TATTAGAGAAGTTTGGGAGACAAAGGGAGGCCAAACTGATCTACAAGAACAATTACTTTTTGATATCCATAAGTTAGAAAAGATGAAGATACATAACATT GAGTTGGGAAAGGCTATGATCAAGGGAAGACTGTGTGGAACTAGAGCACTTGTGGTACTTGATGATGTAAGTAAAGACGAGCAATTACGAGCCCTATGCG GAAATCGTACATGGATTGGTCCAAAAAGTGTAGTAATCATTACAACCAGAGATGTGCGTGTACTTAATGTACTCAAAGTTGACCATGTCTTCAAAACAAA GGAATTGGATAAAAGTGAGTCCCTTGAGTTGTTCAGTTGGCATGGGTTTAGGGAAGAAAGACCAAAAAAAGACTTCATTGAACTCTCAACAAATGTAGTA GCTTATTGTGGAGGATTACCACTAGCTCTTGAAGTCCTTGGATGTTATTTATGCGAGAGGACAACACAAGAGTGGAGAAGTGTTTTGTCCAAACTAGCAA TGATTCCCAATGATCAAGTACAAGAGAAATTAAGAATAAGCTTTGACGGTTTAAGGGATCATATGGAGAAGGCTATATTTCTTGACATATGTTGTTTTTT TATTGGCAAGAACAGAACCTATGTTAAGGAGATTCTGGATGGATGTGGACTTCATGCTGAAATTGGAATAAGAGTCCTTCTGGAACGGAGCCTCATAAAA CTTGAAAAGAATAACAAACTCGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATAATTCGTGAAAGTTCACCAGAGGAGCCCGAGAATCAGAGTC GATTGTGGTTTCAGGAAGACGTACTC BLAST |
Tissue | flowers |
Gene name | LI_gene_70027; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_130921
Blastp | TMV resistance protein N from Nicotiana with 36.56% of identity |
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Blastx | TMV resistance protein N from Nicotiana with 36.29% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425579.1) |
Pfam | NB-ARC domain (PF00931.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |