Id Trinity | FTRINITY_DN57598_c3_g3_i9 |
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Name Transcript | Ll_transcript_130926 |
Sequence | TTCCTTTTGTACCCACTCACTATGTGAAATAATTTGATTTTTGGAATCTTTTTTTATTTATCCTTTTGCTTTTATTGTTACTTTATAAAAAGCATGAAGA GCGCTATGAAGAGTTTGAGTTGATAAAGTCATAAAAGTGCCGAAGATCATCTGTCTCAAGATTTGGTGTCCCATCGTGTACCTGTTCATTTCCCTCCCAT ACTCTCGCCATGTCTTCTTCTTCTTACCATCGGTACGATGTGTTTCTGAGTTTCAGAGGTGAAGACACTCGCAACACCTTCACTTCTTCCCTCTACAGTG CCCTCACTCAACTCACCATCAAAACCTTCATGGACAAGAATCTTGCTAAAGGAACAAAGATCAAACCTGAATTATTTAGAGCAATAGAAGGGTCTAGAAT ATCCATTGTTGTTTTCTCACCAAGGTATGCTGGATCAAAATGGTGTCTTGATGAACTTGTCAAGATTATGGAGTGCCATCGAAGTAATGCTCAAATTGTC GTGCCAGTTTTTTATAACGTTGACCCTTCACATGTACGCCATCAGAGTGGTTATTTTGGTGATTCTTACACACAGCTTATAAGGAAAGAAAGTTTGGGAA ATAATCCACATGTCTTGGCTCAATGGGAGACAGCACTCACTGAAGCTGCTAACTTTGTTGGCTGGCCTGTTGCACCAGACAATTACAATATCATCAAGCT TATTGTTGAAGATATTTACCGGAGGTTAGACAGCACAACCTTGCCTATTACAGATTTTCCAGTTGGGTTAGAATCTCGTGCCTGTGATGTGATTGAGCTT TTGAAAGGGCAATCAAGCGCAGTTCGTGCAATAGGGATATGGGGAATGGGAGGATCTGGTAAAACAACCTTAGCCAAAGTCATCTTCAATCAAATTCATA GAGATTTTGAAGGTACAAGTTTCCTTGCTAATATTAGAGAAGTTTGGGAGACAAATGGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_70027; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_130926
Blastp | TMV resistance protein N from Nicotiana with 44.49% of identity |
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Blastx | TMV resistance protein N from Nicotiana with 44.49% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | mtr-MIR2678 (MI0012053) |
Ncbi protein | Link to NCBI protein (XP_019425579.1) |
Pfam | TIR domain (PF01582.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |