Id Trinity | FTRINITY_DN57602_c0_g2_i3 |
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Name Transcript | Ll_transcript_149170 |
Sequence | TCTTAAACTCACCACTCCTAGTTTTGGAGATCTGAACCATCTTATTTCGGCTACTATGAGTGGAGTTACCTGTTGTCTTCGATTCCCTGGTCAACTCAAT TCAGATCTTCGAAAACTAGCTGTGAATCTCATTCCTTTCCCTCGGTTGCATTTCTTTATGGTTGGATTTGCTCCACTTACATCTCGTGGGTCACAGCAAT ACAGAGCTCTCACAGTACCCGAATTGACACAACAAATGTGGGATGCTAAGAACATGATGTGTGCTGCTGATCCTAGACACGGGCGTTACTTAACAGCATC TGCCATGTTCCGTGGCAAGATGAGCACCAAGGAAGTTGATGAACAAATGCTTAATGTCCAGAACAAGAATTCGTCTTACTTCGTAGAGTGGATACCCAAC AATGTTAAGTCCACAGTATGTGATATTCCTCCATCTGGGTTGAAGATGGCATCTACATTCATTGGAAACTCGACCTCAATTCAGGAAATGTTCAGGAGGG TGAGTGAGCAATTCACAGCTATGTTCCGAAGAAAGGCTTTCTTGCACTGGTACACTGGTGAGGGTATGGATGAGATGGAGTTCACCGAGGCTGAGAGCAA TATGAATGATCTAGTCTCTGAGTATCAGCAATACCAAGATGCAACTGCAGATGATGAGGGGTATG BLAST |
Tissue | flowers |
Gene name | LI_gene_70050; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149170
Blastp | Tubulin beta-2 chain from Oryza sativa with 99.55% of identity |
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Blastx | Tubulin beta-2 chain from Oryza sativa with 99.55% of identity |
Eggnog | protein polymerization(COG5023) |
Kegg | Link to kegg annotations (4331315) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019465027.1) |
Pfam | Tubulin C-terminal domain (PF03953.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |