Id Trinity | FTRINITY_DN57607_c1_g1_i5 |
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Name Transcript | Ll_transcript_148978 |
Sequence | AATAAAATATAAGGTACGGGACTGAATCACTCATTCCATCAATATTCACAAACAAAATCCCACTGCTATCATATCATCTAGCTTGACCTGAACACTGGAT GGGATAAGAGCTTAACGAGTGGTTAGATTGCTTTGTCGGGCCTATTTCTGTATACTTTACTGTGCAACTAACATAGCTACTTAAAAATATAAACTTACTT GCTTGGCAATGATGATATCTTCTATGCAAGCCACACTTTTTGGCAAGGCCTCTTTCTTTCGTCAAAGTAGCAGCTTAAGAAGCTTAACATTTTTTGTGCC TTTCTCTTCATCCACTGCTTCGGTTTCTGCTGACAACCTTTCAAGGAAGAAATGGAGGCAACCAGTTTTCTCGGCATTGGAGCTTGGTGGAGTCAAGGTT AGCAGAGAAGATGTGGTGAAGGATGACCCTACAAATAACGTGCCCGACTCGATATTTTCAAAACTTGGACTGCAGCTTCACAGGAGGGATCAACACCCAC TTGGCATACTGAAGAATGCAATATACGATTATTTTGACACAAATTATTCAAATAAGTTCGATAAGTTTGACGATCTTTGTCCTATTGTGTCAGTGAAACA GAATTTTGATGATGTATTGGTTCCTGAAGGCCATGTGAGTAGGAGCTTAAATGATACATACTACATAGACCCTCAAACTGTTTTAAGGTGCCATACAAGT GCTCATCAGGCAGAATTATTGAGAGCTGGGCACACCCATTTCCTTGTTACAGGCGATGTTTATCGCAGGGATTCAATTGATTCAACCCATTATCCTATCT TCCATCAGATGGAAGGCTTTCGGGTTTTTGTTCCAGATGAATGGGAGGCATCTGGAATGGATGCCACGTCATTTGCAGCAGTAGACTTAAAGAAATGTCT TGAGGGCTTAGCACGTCATTTATTTGGTATTTCCAAATGGCTGATATACACATTTCATTATCAGTTGCTGAAGTTTGATAATTAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_70099; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_148978
Blastp | Phenylalanine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 69.71% of identity |
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Blastx | Phenylalanine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 69.71% of identity |
Eggnog | phenylalanyL-tRNA synthetase, alpha subunit(COG0016) |
Kegg | Link to kegg annotations (AT3G58140) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419283.1) |
Pfam | tRNA synthetases class II core domain (F) (PF01409.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |