Ll_transcript_148566

• Id Trinity: FTRINITY_DN57629_c0_g1_i2
• Name Transcript: Ll_transcript_148566
• Sequence: ATCAAAGGGACACACCGAAAGTGTTGCAATGCACTACTACTGTTGCTGATATGCGCCATTGAGTTTGCGATCCCATTCTTTCAATTTCCCTCTTCAGATC CAAATTTCCCCATTTCCATTCCCAATCTCAATCCCACCATCCTAATGGAGAGTAGTGACAGCAGTTATTCGACCCACCTTATTGATGGAGACGGTATATT CAATGTTGCCGGCGTTGAAACTTTTATGAAAGAAGTAAAGTTGGCTGAGTGTGGGCTTTCTTATGCTGTAGTTTCTATTATGGGTCCACAAAGTAGTGGC AAGAGCACACTATTAAATAATTTATTTGGTACTAACTTCAGGGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGAT GTGCTGGCATAGAGCCTTGTACACTAGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGCGGAGAGGATGATACTGCATTCGAAAAGCAGAGTGCTCT ATTTGCTCTTGCTGTCTCAGATATAGTACTAATAAATATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCGCTTTTGAAAACTGTTTTT CAGGTCATGATGAGATTGTTTAGCCCACGCAAAACAACATTGTTGTTTGTCATACGTGATAAAACAAGGACCCCACTTGAAAATCTAGAACCTGTTTTAC GAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCTCACATGGAAACCCCACTTAGTGAATTTTTCAATGTTGAAGTTGTCGCTCTTAA CAGTTATGAAGAAAAGGAAGAACAATTTAAAGAGCAGGTCGCAAGTTTGAGACAACGATTTCATCATTCCATTGCTCCTGGTGGGCTTGCTGGGGACAGG CGTGGAGTGGTTCCTGCTTCTGGCTTTTCATTTAGTTCTCAGCAGATATGGAAAGTCATCAAGGAGAACAAAGACCTTGACCTTCCTGCACATAAGGTCA TGGTTGCCACTGTACGATGTGAAGAAATTGCCAACGAGAAGTATGCCGCTTTTGCTGCAAATGAGGAGTGGTGTCAATTGGAAGAAACTGTGCAATCTGG CCCTATCCCGGGATTTGGGAAAAAGCTCAATTCACTACTTGATGTGTATTTGTCAGAGTATGATGCTGAAGCGATTTATTTTGATGAAGGTGTGAGATCT GCTAAACAAAAACAACTTCAAGAAAAATTGTTGCAACTTGTTCAACCTGCATTCCAATCTGCATTGGCACATGTAAGATCTGGAACCTTGGATAAATTCA AGGAGACATTTGACAAGGCTTTAGAAAGAGGGGATGGATTTTCTGAAGCTGCTAATAATTGCAACGGGTCTTGTATGGCTGAATTTGATAAAGCATGTGC AGATGTTGTTGTTGAACAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAACTGCAGCGTGATATTGATGCACATGTTGCATCTGTACGTGCAGCTAAG ATTTCGGAACTTACTTCATCATATGAGGAAAAACTGAAAGAGTCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGGAGCTAATAGTGATACTTGGCCAT CAATAAGGAAGCTTCTTAGGCGTGAGACTGAATCAGCTGTTTTGGGGTTCTCTAGTGCACTTTCCGGGTTTGATATGAACGAAGACACAAGACAGAAAAT GATTTTGAGTTTAGAAGATTATGCAAGGGGTGTGGTCGAAGGAAAGGCTAAGGAAGAAGCTGGAAGAGTTCTAATCCGTATGAAAGACAGGTTTACAATG TTGTTTAGCCATGACTCTGATTCAATGCCTCGTGTTTGGACGGGGAAAGAAGATATTCGTGCCATCACCAAGACTGCTCGCTCAGATTCTTTGAAGTTGC TATCTGTTATGGCTGTGATTCGTTTGGCCGACGGTGATACTGATAATATTGAGAAAACATTAGCAGTTGCATTGGTTGATTCATCAAGCAGTGCTGCTAT TAAGAGCATCACAATGGTTGACCCACTAGCTTCTAGCACCTGGGAACAGGTTCCATCCTCTAATACATTGATCACACCTGTCCAGTGCAAATCTTTGTGG AGACAATTCAAGAGTGAGACAGAGTACACTGTCTCACAGGCCATTTCTGCACAGGAGGCCAACAAGCGTAGTAACAACTGGTTGCCTCCCCCATGGGCAA TACTTGCTTTGGTTATTCTCGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTCTCATCTTTGTTGGTTATCTTCTTCTTAAAGC CCTATGGATGCAGCTTGACGTTTCGGGTGAATTCCGCAATGGAGCTCTTCCCGGAATCATATCCTTGACTAGCAAAT
• Tissue: flowers
• Gene name: LI_gene_70299;
• Additional information: details;

Expression of Ll_transcript_148566

FPKM

• FPAB: 6.7
• FPNAB: 11.3
• LF1: 11.9
• LF2: 7.9
• LF3: 7.5
• LF4: 6.7
• UF1: 8.2
• UF2: 8.1
• UF3: 6.9
• UF4: 4.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_148566

• Blastp: Protein ROOT HAIR DEFECTIVE 3 homolog 1 from Arabidopsis with 77.28% of identity
• Blastx: Protein ROOT HAIR DEFECTIVE 3 from Arabidopsis with 77.46% of identity
• Eggnog: GTPase activity(ENOG410XPVJ)
• Kegg: Link to kegg annotations (AT1G72960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456495.1)
• Pfam: Root hair defective 3 GTP-binding protein (RHD3) (PF05879.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;