| Id Trinity | FTRINITY_DN57629_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_148574 |
| Sequence | ATCAAAGGGACACACCGAAAGTGTTGCAATGCACTACTACTGTTGCTGATATGCGCCATTGAGTTTGCGATCCCATTCTTTCAATTTCCCTCTTCAGATC CAAATTTCCCCATTTCCATTCCCAATCTCAATCCCACCATCCTAATGGAGAGTAGTGACAGCAGTTATTCGACCCACCTTATTGATGGAGACGGTATATT CAATGTTGCCGGCGTTGAAACTTTTATGAAAGAAGTAAAGTTGGCTGAGTGTGGGCTTTCTTATGCTGTAGTTTCTATTATGGGTCCACAAAGTAGTGGC AAGAGCACACTATTAAATAATTTATTTGGTACTAACTTCAGGGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGAT GTGCTGGCATAGAGCCTTGTACACTAGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGCGGAGAGGATGATACTGCATTCGAAAAGCAGAGTGCTCT ATTTGCTCTTGCTGTCTCAGATATAGTACTAATAAATATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCGCTTTTGAAAACTGTTTTT CAGGTCATGATGAGATTGTTTAGCCCACGCAAAACAACATTGTTGTTTGTCATACGTGATAAAACAAGGACCCCACTTGAAAATCTAGAACCTGTTTTAC GAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCTCACATGGAAACCCCACTTAGTGAATTTTTCAATGTTGAAGTTGTCGCTCTTAA CAGTTATGAAGAAAAGGAAGAACAATTTAAAGAGCAGGTCGCAAGTTTGAGACAACGATTTCATCATTCCATTGCTCCTGGTGGGCTTGCTGGGGACAGG CGTGGAGTGGTTCCTGCTTCTGGCTTTTCATTTAGTTCTCAGCAGATATGGAAAGTCATCAAGGAGAACAAAGACCTTGACCTTCCTGCACATAAGGTCA TGGTTGCCACTGTACGATGTGAAGAAATTGCCAACGAGAAGTATGCCGCTTTTGCTGCAAATGAGGAGTGGTGTCAATTGGAAGAAACTGTGCAATCTGG CCCTATCCCGGGATTTGGGAAAAAGCTCAATTCACTACTTGATGTGTATTTGTCAGAGTATGATGCTGAAGCGATTTATTTTGATGAAGGTGTGAGATCT GCTAAACAAAAACAACTTCAAGAAAAATTGTTGCAACTTGTTCAACCTGCATTCCAATCTGCATTGGCACATGTAAGATCTGGAACCTTGGATAAATTCA AGGAGACATTTGACAAGGCTTTAGAAAGAGGGGATGGATTTTCTGAAGCTGCTAATAATTGCAACGGGTCTTGTATGGCTGAATTTGATAAAGCATGTGC AGATGTTGTTGTTGAACAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAACTGCAGCGTGATATTGATGCACATGTTGCATCTGTACGTGCAGCTAAG ATTTCGGAACTTACTTCATCATATGAGGAAAAACTGAAAGAGTCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGGAGCTAATAGTGATACTTGGCCAT CAATAAGGAAGCTTCTTAGGCGTGAGACTGAATCAGCTGTTTTGGGGTTCTCTAGTGCACTTTCCGGGTTTGATATGAACGAAGACACAAGACAGAAAAT GATTTTGAGTTTAGAAGATTATGCAAGGGGTGTGGTCGAAGGAAAGGCTAAGGAAGAAGCTGGAAGAGTTCTAATCCGTATGAAAGACAGGTTTACAATG TTGTTTAGCCATGACTCTGATTCAATGCCTCGTGTTTGGACGGGGAAAGAAGATATTCGTGCCATCACCAAGACTGCTCGCTCAGATTCTTTGAAGTTGC TATCTGTTATGGCTGTGATTCGTTTGGCCGACGGTGATACTGATAATATTGAGAAAACATTAGCAGTTGCATTGGTTGATTCATCAAGCAGTGCTGCTAT TAAGAGCATCACAATGGTTGACCCACTAGCTTCTAGCACCTGGGAACAGGTGCATTTTATTGTTCTTGCTCAATTGTATTTGATGAAGTATTGAATTGTT CGCACATTTCGGTAGGTGAGTGACCAGGTTGGCATCGATTAGTGGTTATTCTCTAAAAGTGTTGACATGTTAATCAATTAATATATATTTTAAGCCATAC ATTCTATTTTTTTGGTTCCTGTGTTCTTATGGTTTCAAATTTTCTATCTTGGGAACTGACCTGTTTTTGTAACCAAAATTTTTACGCAGGTTCCATCCTC TAATACATTGATCACACCTGTCCAGTGCAAATCTTTGTGGAGACAATTCAAGAGTGAGACAGAGTACACTGTCTCACAGGCCATTTCTGCACAGGAGGCC AACAAGCGTAGTAACAACTGGTTGCCTCCCCCATGGGCAATACTTGCTTTGGTTATTCTCGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGT ATTTGGGTCTCATCTTTGTTGGTTATCTTCTTCTTAAAGCCCTATGGATGCAGCTTGACGTTTCGGGTGAATTCCGCAATGGAGCTCTTCCCGGAATCAT ATCCTTGACTAGCAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70299; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_148574
| Blastp | Protein ROOT HAIR DEFECTIVE 3 homolog 1 from Arabidopsis with 76.57% of identity |
|---|---|
| Blastx | Protein ROOT HAIR DEFECTIVE 3 from Arabidopsis with 77.41% of identity |
| Eggnog | GTPase activity(ENOG410XPVJ) |
| Kegg | Link to kegg annotations (AT1G72960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456495.1) |
| Pfam | Root hair defective 3 GTP-binding protein (RHD3) (PF05879.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |