| Id Trinity | FTRINITY_DN57638_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_150303 |
| Sequence | GATTTATATATGAATGATGAATGAAAATACGAATTTATCCGATATCGGTTCATACATTTTTTCTCTTTTTTTCGAAAAATATATATAAGATTTGGTTTTT CACATTTGATGATGGTGTAGACTTGAAAGAGGAGACCATAGCAACACAGCAATATATCATATCATATATTGAAATGTGAAATTTTGTGAATGAAAGATTC TGCAATCAAAATTATTCATTCAATTTCTCTCTTTCAAATTTCACCATTCAATTCTTTCACTTTCATTCCAAATTTCGTTCATCTCAATTTCACAATCCCT TAATCTCAATAGTGCTCTGAATTGAGTGAGTTAGGTTTAGTTATTTTCTCAATTGAAGAAAAAAAAGCATGTCGAATCAGGTTTCAGTGAAAGACCTTGT TGAAGAAGCCAAGAAACGTGTTGTAATTCTTCTTGTTTGCGTTGTTGGTCTCTCATATCTCATGTCACTGACAAGCTCGTCAGTTTGGGTCAACTTGCCT GCTGCAGTTTCCTTAATCATCATTCTCCGCTATTTATCACTAGATTTTGAAATGAAGAGAAAAGCTGCTGCATATAACAATAAAGCAAGCTCCACTAGTG TTCAGTCATCGAAGAAGCCTCCTGAAAACTCTGAAGTCGTTGCTAAGTTTGACTGGAGAGCAAAAGTTAATTCTCCTGTTGTTGAGGATGCAATTGATCA CTTCACTAGACATTTAGTTTCTGAGTGGGTGACAGACCTGTGGTACTCTCGCATAACTCCAGACAAAGAGGGGCCTGAGGAGTTGGTTCAAATAATAAAT GGAGTTCTTGGGGAGATTTCAGGACGCATGCGAAATATAAATTTGATTGATTTTTTGATAAGGGATCTTATTAACCTCATTTGCACACACTTGGAGCTGT TTCGTGCTGCTCACTCAAAGGTTAAAAAACAACATAAAGGTTCACTAACAATTGAATGTCGAGATACAGAACTAAAACTTGTCTTGGCTGCTGAGAACAA ATTGCATCCTGCTTTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGAAGCATGTGGTGAATGGTCTTATGTCTGTCACTTTCAAGTCTGGGGATTTGCAG TGTTCTTTCTTTCGATATACTGGCAGGGAGCTTCTTGCATGTGCTGTAATGAGACCTGTCCTAAACTTAGCCAATCCAAGATTTATTAATGAAAGGATTG AATCTGTAGTAGTTAATAAGACCAAGATTAATAAGGGGGCTTCTGCGTCTCCAAAAGCATCCGACACTAAAACAGATGAGTCGCAGATTCCATCTGACCA ATTTTCCGAGTGTTTAGATCCTTCTGCTAATGGTGTTGAACTTGTGATGCTAAGAAATGATCAATCAAAAAATGCAAAAAAATCATCTGCACGAAATAAT CCCAATCATAATTTTAATAAAGATCCATTACTTGCAATTGATGCTCGTTCTTCTCGTTCATGGACATCATTGCCTGCAAACTCTCATGCTAATAATGACC AAGGTATTCAACAGCATCACTCAGGAGGAGAGTGGGGAGATATCTTAGATGTCATATCTCGCAGAAAGACCCAAGCCCTTGCTCCAGAGCATTTTGAGAA TGTGTGGACGAAGGGTAAAAATTACAAGAAAAAGGATGGTAAGAAACAGTCAAATGAGCAAGTCTCACCACATCCTGTTGTAGGAAAATCGCTGAAGGTA GATCATATGAAGGCTACTGGACCCAAGGAAAAGGACAGAACTCCCAAGCTTAATCCCTCTACGGGAAGCCACATTAATTCTGAAAATGTAGACTTCCATG CAGACAAGAATCGACCAAGTTCTCTAGTTACCTTATATAAAGATGATGAGCACTATGACATGCATATGCAGATGGGTGAATCAGAGAGCAGTACTTCTTT TACGTCTGAAGATGATGAAACTACTACTGTCACTGGTCTTGATTCCCCTGTAACTAAGGTTTGGGATGGAAGAAGTAATACAAAACAGGCTGTTACTTAC GTTCATCACCCACTTGAAAATTTTGATAATCATGGGAGAAAAAAGAGGAATAAGAACCGCTCTCGCTATCCGACACTATCCGTAACCCAATCGGGGAGTA AAAGGTCTAGACCAAGTGGTCATGACATACATACGTGGCAGGAAGTTGAGAGGACAAGGTTTTTATCAGGAGATGGTCAAGACATACTTAGTTCTTCAAG ATCACATGTAAATTCTGAGGACTCTAGTAATGATGATGATTATACTGGAAGTTTGGGTAGAATTTATAGTGGAGCAACAGCCTCTTCTTCCACATCCTCA ATTTCTAAATCAGAATCTCATAGTTTGGCTGTTAATCCCCTAAAAAGTTCTTCAGTATTAGATTCTTTTTTCAAGTTGAAATGTGAGGTCTTAGGTGCAA GTATTGTGAAGAGTGGTTCAAAAACATTTGCTGTTTACTCCATATCCGTAACAGATATAAACAATAACACCTGGTCAATTAAAAGAAGGTTTCGTCATTT TGAGGAACTACATCGACGCCTGAAAGAGTTCCCCGAGTATAATCTTCATTTGCCTCCAAAACATTTTCTGTCAACAGGTTTAGATATCACAGTCATTCAA GAGCGGTGTGAATTGCTGGATAAATATTTGAAGCAACTTATGCAGATGCCAATAGTTTCAGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCTC AGACATACATATTCTCGAATTCATTTTCTATCATGGAGACATTATCAGGTGACTTTGATCGAAAATATTGAACATACATATTTTTATTCTTTCCCTCCTT TTAACACCTTTCGGATTCCTATGTTTATCGGAAAATTTTCTAGTTGGCATGGATGCTAAACCCTCCGAGAAGACTAAAATTGCTTCCAATTTTTCTGGAT CTGCAAGTGACACTTCTGCCTCTCGAAGAGAAAACTATAGCTCTGGAAGTAAAGAGGCTGTTTTGCAAACAAGAAATAATGTTGTGGTTGATAGGTTAAG GTCAAAAGTAAATGGCATGTCTCCTTCTCTACCAGTAAAGAATGCACAGGAATCTAGAAAGTCATTGGAGAGTTCTGGTGGTAATACAGATATTAGAGTT TCTCCCAATAACTTGGAGCAGACAGTGAAAGTAAGGGATAGTTTAGACAAGGTGTCTGATTTGCACCATGATACTTCTGATACTCTTCCAGCAGAGTGGG TACCACCAAATTTGAGTGTACCAATACTGGATCTGGTTGATGTTATCCTCAATCTTCAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAA ACAAATCTTACAATTAGGAATGGGTGATGCCTTTGATGATTGGTTAATAGATAAAATCCAGCTTCTCCGTAAGGGATCAGTAGTTGCTTCAGGGGTTGAG CGAGTTGAGCGAGTAATCCTCTCAACCATTTATTTTTTAAATTTGTGATGTTCTGGAACTGTCCTCGTCAATATAAGTTTCTTTCTCTTTGATCAAATGA TATATTTATATTCCTTATATTATACAACAATGATAATCTCTCTTTGCAATAATACAGTTCTAATTACTGTGATGGGGCAGAATGCTGTGTACAGTGATTA GATAAGTGTATGATGTACTGATGAGGTATTGTGACTGCAACTTCAATAGATACTCTGGCCTGATGGAATATTCTTAACCAAGCATCCAAAGCGACGACCA CCACCGACACATTCTACTTCATCTCAGAGCTCATCTCAAAGCCATCAATCCGCAGAAGTATCTTCCCCAAAGAAGGTTGATGAGCAGCAACGGGAGGCAG ATCGGCGTGCGAAGCTTGTCTATGAGCTAATGATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70371; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_150303
| Blastp | Sorting nexin-16 from Homo with 29.81% of identity |
|---|---|
| Blastx | Sorting nexin-13 from Mus with 22.46% of identity |
| Eggnog | sorting nexin 16(ENOG410Z8KU) |
| Kegg | Link to kegg annotations (64089) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431808.1) |
| Pfam | PXA domain (PF02194.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |