Id Trinity | FTRINITY_DN57649_c1_g1_i8 |
---|---|
Name Transcript | Ll_transcript_150764 |
Sequence | AATACCACAAAACACGAGGACCAGTTTGGAACAAAAGCCGAAGGAGGAGACTAAGAAGTAGTAATGGGGAAAGATACTACGGTTTTTCGCCATCCCAAGG TTATTTTCGGCATTTCACTAAATCAACACAACACGCTCTTCGCCTTCTTTGAGGTAACCCCCGATTTCACACCTACCTTTCTTTCTCTCCCTCTTCCCAT TTTCAATTATATTCCCAATTCCCAATTCTAACTCAAAACCCTAATTTATTCTTTTCAACTCGTCTTCGATTTTGACCCAGAATAATCGGAAATCTATCAT AGCTTCAAGTGCTTGCATAAGAAAAGTTTATATTTGTATGATTTTTGAGTTTTGGGTTTCAAATTTTCTATTCCTTGCGCCGGTGTTTCCGTTTCTATGG CTAAAGGTACGGAATTAGAGCAGTTTGTCGCAATGACTAAGGTTCGGACAGGTCTGAAGAGGGAATTTGCATTTGCCTTGCAGTCTAAGTCTGAAATCAA CTGTGGATCTCTCGGCCGAACCCGGTCCGGAAAGAACCGCGACACTTTTCCGGTTCAAACTACTTCCGTGAGAAAGCGGTACAGGAAGAAGGAGGATAAT GGGGGTGCTGGTGATGTTATGAGCGAGGAGGAAGCAAAAAGTGATGTGGTGGATCCTAAGATTGGGGAATTCATTGAAAAGAAGGAACTTGAGATTGAGA GAGCAATGCCAATGGGAGTTTGTGAAAAGGAGACAAAGTGTGATGTGGTAGAAACCGTCCGTGATGATGAACCTAAACCTGGTGATGAAATTGGGCAACC TGATTTTAAAATTGAGGTTAAAGAACCTCAGATGGAAAAGGGGGAATTTGTTGTTTGTGAAGAGGAACCGAAGGGTCATTTTGTGGTAGAAACTGCGAGT GATGATGAACCAAAACCTTGTAATGAAGTAGTTCAAGTCATTTGTGAAAGCGGGGTGAAAGAAGTTGAGACACCTCGTTGTCCTCCTAAGGAAGAAGGTG TTATTGATGGGACATCCTTGATTTTGGTTAATGATGATTGCAAGGTAAACAACATGTCTTCAGAGAAGCCGTTAAGACGATTTACGCGGTCAGCACTTAA GAAAACATTGGATGATGCAAAGGTTGAGGAAAATGCTAGTACTAAAGCTGTTAAAATTGGTGGTGTAAAAATGGAAACTGGATCTGAAAAGTTAACAGCT GCCCCAATTCGAACAAAGTTGTCCAAGACCACAGCTAAGAAGTTATCATCAAAGCTGAAGGACCTTCTGTCTACAGGGATTCTTGAGGGTCTAGCGGTGA ATTATGTATGTGACATGAAGGAGCGAAGGCCTGGAGAAACAGACCTAAGGGGAGTGATTAGAGGCAATGGGATTGTGTGCAATTGTGAAATTTGTGACGG GGATGAGGTTGTCACACCCAATGTGTTTGAGTTGCATGCTGGTAGTTCAAAAAGACAGCCAATGGAACATATTTATCTTGAGAATGGGATTACTCTTCGT GATATCATGAATACATGCTTGAATGTTCCTTTAGACACTACGGAGGATGCTGTCCAAACAGCCCTTGGAGGGTTCACTATGAAGAAATCCGCCTTCTGTT TTAATTGCAAAGATGTCAATGTTGCATCAAAACTATTGTGCAATTCATGCTTGGAGTTGAAGGACTGTCAACCTAACCCAGCTCAAACAACTGACTCTAG CAACAGCTGTGTTTCACTAGCTGTTCAATCCAGATCTCCAGAACCAGTTGTGGTTCCAAAATCATTAAATAGTGGAATGAAGCACAGCACATCACGTGAT AAAAGTCAGGGAAGAATAACTAGGAAGGATGTACGCCTGCATAAGTTGGTATTTGAAGAAGATGTGTTGCCAGATGGAACTGAAGTAGCATACTATGCTC GTGGGAAGGTTGCTTCAATAGTGCCTTATTCTTATTTACATATTTTTGTTAGTTTAAACTTTTTTGAATGTGTTTTTCTATTGGCAGCAACTGCTGGTGG GTTATAAAAAAGGTTTTGGAATTGTTTGTAGCTGTTGCAACTCTCTGGTCAGCCCCTCCACGTTTGAAGCTCATGCTGGTTGTGCATCACGACGGAAGCC TTACCTGCACATTTACACATCTAATGGGGTCTCACTCCATGAGTTGTCCATCTCTCTATCGAAAGATCCGAGGTTTTCTATCAGTGATAATGACGACCTC TGCACTATATGTCAAGATGGAGGGGATCTTTTGTGTTGTGATGGATGCCCAAGAGCTTTTCATATAGATTGTGTTCCTCTTCCATGCATTCCTAGTGGTA CCTGGTATTGTAAATATTGTCTGACTGTTTTCCAGAGAGAAAAATATGTGGAGCATAATGCAAACGCTCTGGCAGCTGGAAGGATTTCAGGCATTGATCC TTTAGAACAGATACACCAGAGGTGCATTCGCATTGTCAAAACTGGAGAGTTTGATCATGGTGGATGTGCACTATGCAGAGGCCATGATTTCTGCAAAAGC TTTGGTCCTCGGACAGTGATTATTTGCGATCAGTGTGAGAGAGAATATCATGTCGGTTGTTTGAAGGATCATAACATGCAAAACCTAGAGGCATTGCCTG AAGGGAATTGGTTGTGCTGCTTGGATTGCAATCAAATTCATACTACTTTGCTGAATTTGGTAGCTTGTGGGGAAGAGAAACTTCCAGATTCCCTTGTAAG TGTGATTAAAAGGAAGCATGAAGAAAAAGGTTTAGAAATTGGGGCTGGTCTTGATATAAAATGGATGGTTCTGAACTGGAAAATGGTTGCGTCTGATGAG ACTAGGCAGTTGCTTTCTAAGGCTGTTGCTATCTTCCATGATCAGTTTGATCCTATAGTTGATTCTGCTTCAGGCCTTGATTTCATTCCAGCAATGCTTT ATGGAAGGAACATCAAGGGTCATGAATTTGGTGGAATGTACTGTGCATTGCTCACTGTCAACCAAGTAGTTGTATCTGCCGGAATATTTCGTATCTTTGG GTCAGAAGTAGCAGAGCTTCCCTTAGTGGCAACAATTGCAGATTGCCAAGGACAGGGTTACTTCCAGTCCCTTTTTGCTTGCATTGAGAGGCTACTTGGA TCACTAAGTGTGAAACACTTGGTCCTACCAGCTGCTGAGGAAGCTGAATCAATATGGACCAGTAAATTTGGGTTCACAAAGCTAGGCCAACATGAGATAA ACAATTATAAGAGACAATATCACTTAATGGCATTTCAAGAGACCCCATTACTACGAAAGACAATTCCTGCACTCTGAACTCTGAAGTACTTTTCAACCTG GAGTATGTTATAAAATTTTGGGGAGTCATTTCCAAAACTTTTGTTTACATAGATTCCGAGCAAAACATCTAATTATATGTGCATAAGCTATTTTTTTTTG TTTTCGACAGTATCTACGGGTAAAGTTTCTCCTGTTATTTTTTTTGTCGCACAGATATTTGTTAATAGAGGAACACATCTAATTATATGTGCATAAGCTA CTTGTAAATTTTGATGTTAAATATTAAAAATTGAAGAGAGAGAAAATGGTAAAGAGAAATTAGTGAAGTGTTGTGAGATTACGGATTCATTTTAGGACAA AATGTGTTAAACAATTATAAAATAATGTGATACTCACGAACAACCTGATATGCTCTTACCTTTATTTTTTATCGACATCAACAATGCTTATGAATTTAAA TGTAATGCTTATTAATTTGATTGCAAATCGTTTGTTGACTTTCAATTTTTTCCAAGTCCCTGATATTAACCCCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_70443; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_150764
Blastp | - |
---|---|
Blastx | Increased DNA methylation 1 from Arabidopsis with 28.67% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448795.1) |
Pfam | TPL-binding domain in jasmonate signalling (PF16135.4) |
Rfam | - |
GO | - |