Id Trinity | FTRINITY_DN57655_c1_g4_i5 |
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Name Transcript | Ll_transcript_149980 |
Sequence | CTTTTTGTTTGAATAGATTTTATTTGAAAAGAGAACAAAGAAACCAAACTCCAACGTCTCTCTCTCTCTCCTCTTTGCAGATTCTTTCCCCATTCGGATC TGCAATATTAGTATTTGGGGTTTCATATCTGAACTAAAGTTACTGTCTTTGAACCCAAACGAGGAGTTTGTTGCTGTGGTTCCTTAAAGGGACTATAATG ATTTCGGGTGGAAACCTTGGAGAGAGTTGCAGTCGAGTCGGAGTTCGGACAATTACTTGTCTGCGAAAAAGCTATGGATGGTGATCGGAAAACCCCCGAT CCATCTGATTATCCTATAGATGGTGCTCAGAAAGTTAGATCATTGCACGGGAGGACTAGTGGCCCTACAAGGCGTTCTACAAAGGGGCAATGGACGTCCG AGGAGGATGACATCTTGAGGAAGGCTGTTCAGCGATTTAAAGGAAAGAATTGGAAAAAAATAGCTGAGTGTTTCAATAATAGAACTGATGTACAATGCCT ACATAGGTGGCAGAAAGTTTTAAATCCTGAGCTTATCAAAGGTCCATGGTCTAAAGAGGAAGATGAGGTGATTATTGAACTGGTGAACAAATATGGCCCT AAAAAATGGTCTACTATTGCACAACATTTACCTGGACGTATTGGTAAACAATGTCGAGAAAGGTATGGCTTCTGGATTTCTACTGGTTCTCGCATGTGTA CTGTTGGAGAGTTGGAGTAACTTTCTTTCGTAAGCCAAAAACAAATGTTTTCTATTCAAAAGTTTGTTTGTGGGATCATGTCCTTTCACTTATCATGGTA GTATCTTCTTCCCATCCATAAATCTTACTGGAGGCTTTTCTACTTTAATTATGTTCATTTTCATCAGTATAATTTGTGATAACTTATTAGGTGGCATAAT CATCTTAATCCGGCTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTAGCTCTAATACATGCTCATCAGATTTATGGGAACAAATGGGCGGAATTAA CGAAGTTCTTGCCTGGAAGGTAAGTATGTTTCTTATTTATTGATGTTTCGTCTGTGGTTTGGTTATCCGAATTCCGAAGTACTGCAAGTTATGGTATGAG AAAGATTTTTTAATTACAGCATTATGATAAAATTTTATATTTTTTTCCTACTACAGTAACCCTGAAGTAAGTGCAGGGAATCCAAAACCTGTTGTCATAA TATTCCCGGTTTTTCCATTGGCCGCCGTATCAGTTCATTTTAAATCCTCTTTTATCAATAGCCCTTTAGAGTTGTGATGTACTTGTGCTTCTGTGGAAAC AGGACCGACAATGCTATTAAAAATCACTGGCACAGTTCTGTAAAAAAGAAATTGGATTCTTACTTGGCGTCGGGCTTGCTTAATCAATTCCAATCTGTAC CTCATGTGGGAAATTCAAATCAATCGATGGTTATAGGCTCTTCGAGCTTGCAGTGTGGAGATGGTAATGATTCAAAGCAGACAGAAGGAGAAGAAGTTTC GGAGTGTAGCGAGTCAGCTAATGGTGGTCATTTTCCATCAGCAAGAGAGATGAGCAATGCTGGCTTACAAACTAGAGAGGACTACAGAGCAAATGAAGAT TCTAGTCATGGAAAGGATCATAGTGCATATCAAGCATGCTGTTCAGAGCCATATTATGTGTCTCTTGATGATGTTACTATATGCGACCCAGACATTACTC GCCAAGACGCTCACGCTTCTCAATTTATTGAACATAAATTCTCACATGAATCTGGAATTTCTATTAGCAGGGATGGTCAATTTAATTTTCATTCCTTCCC CAATATTTCATCAGAGGGCTTGGCGCAGAAATCCTCAAAATTGCAAAGCAACTGTGTAGCTCCTAGTGAAATCTGCGACTATGTTCCGTTTCAAACTTCA GGGAGGTTAGCTGTTTCTACATCCACGGGACCTACTTCTACACATTCTGTTAGACCAGAGCCCATGTTGATATCTGATGATGAATGTGGCAGAGTCCTTT TCTCAGAGGCAGGGAACGACACAGGCTTTTGCTCCGGAGATAATAATGGTGTAGATTTTGTCGACTTTTCTGGATATACTTCATTTCTTTCCCAGTCGTG TGATATCCATATGTCTGAAACCGGTGGAACTTCAACTTCACAGCAAAGTTGTCCTCCCTGTTCTAATACTTTTAATACTTCATCCTCTCAATCTGTGCCA CCAGTACTTTCTTCTAGTGGCCGCTGTCTGGTTTTTACTGCCAATGATAATCAATTATTTGAGCCGGAGGATCAGCAGATTGTTTCTGGTGCACCTGATA ATTTTGTTTATGCCAATGACATGTCCAGTTCTCCCCGTGTTGATGGTATAGATAGTGCAGTAATGCAAAAGGCACCAGATATTGTGAAGGATACTTCAAA GCTGGTCCCTGTAGATAGGTTTGGCTGCGCATCAGGATCTATGCAAACTTGTTATCCGACAGATGAAAAGCCAACCACACATATAAACAAGGAGGGTGGG GGAGCTCTATGTTATGAGCCTCCTCGTTTTCCAAGCTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGGGCTGATATGCTGCAAGAATTTA GTCCCCTTGGTATCCGCCAGTTTATGATGTCATCAATGAACTGTCTGACACCTTTCAGGTTGTGGAGCTCACCCTCTCGGGATGATAATCCAGATGCATT GTTGAGAAGTGCAGCCAAAACTTTCACGGGCACCCCATCCATACTAAAGAAACGTCGCCATTGCCTGTTGTCACCACTGTCAAATAAAAGAATTGGCAAG AAACTTGACGCTGACATGGCAGCCACACAGACCAAAAATTTTCCCAGCTTGGAAGGCATCTTTAATGGTAATGAGATTTCGGAAGTAGATATGCTTTCTC CAACTGTAATGGAAAAAAGGAACTCTAATCTGGCAGTTGATGTTGATAAAGAAAATTGTGGACCAGCCTTCAAAGGGGAACAAGTGGATGAGAAATTGAA ATCTGCAATTTTGGACAAAATGAATTCAGAAAAAGTTACCATTGACAGTAACTCTGAGGATAAAATTAAGCAGCGGCCTCTTGATATTGATGCTAAAATG AAGACCGTTGTTGATGCTGCTGCTGATATTGTGCGACAACCTTCCGGAGTTTTGGTTGAACATGATATAAATGACCGGTTGCTGTTCTCTCCTAATCAAG TTGGTTATAAGTCAGACAATGTTCTGGGTTCAAGTGCTAGAACTCCCAAGAAGTTGGACGATGAGAGTTTGGAAGAAGCTTCAAATCAGAGCATCCCTTT GAAATTAGCATCTGAAAAACCATGCCCAAATGTTAACTCTCCTTTTGTTCATGCAAAGGAGCATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAATCC GTCTGTTCATCAACCCCAGGGGAGAACTCACGGTATCAAACCAGAATCGATGGTGCTTTTGAAACTAGTAACATATTTGCTTCAACACCTTTCCGGAAAA GCCTTGAGTCACCTTCTGCATGGAAATCTCCCTGGCCCTTCAACACTCTTCTGTCCAGCCCCAGATTTGATACCGAACTTACAATTGAGGATTTTGGGTT TTTAATGAGCCCGGGTGGTAGAAGCTATGATGCAATCGGATTGATGAAACAAGTCGACGAACAAACTGCTGCCACATATGCCAATGCTCAGGAGATTTTG AGAGATGAAACTCCTAAGGTGTTGAAGAAAGAGACATTTGGAAACAAGGATGGGGACGAGGAAAACAATGATATATGCAAACAGGCCGGGAAAGTTTCTC AATTGGGTTCAAATTCTTTGATGGAGCGACGAATACTCGACTTTAGTGACTGTGGAACACCAGGCAAGGGGGGTGATAACAGCAAATCCTCCTCAGCTAT GAACTTCTCAAGTCCTACTTCATACTTGCTGAAAGGTTGCAGATAGCTGATTGCCAATTATAGCTAAAATCTCCAGATTTTTGGACTCTGAATTTCATGT TTTAATATAAATACTATAAATACACATATGCATAGTATATGCCATTTTTCAGATTTTTTGTTTTGACTTCTACAGTGACAAGACTTGTTGTAATTGGAAT TAAAAATGTTATTTAACATTTTTTATATAAATTAATAATCAAACAACTCTTCATAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_70503; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149980
Blastp | Transcription factor MYB3R-4 from Arabidopsis with 31.68% of identity |
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Blastx | Transcription factor MYB3R-4 from Arabidopsis with 31.39% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT5G11510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447482.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |