Id Trinity | FTRINITY_DN57655_c1_g4_i8 |
---|---|
Name Transcript | Ll_transcript_149983 |
Sequence | CTTTTTGTTTGAATAGATTTTATTTGAAAAGAGAACAAAGAAACCAAACTCCAACGTCTCTCTCTCTCTCCTCTTTGCAGATTCTTTCCCCATTCGGATC TGCAATATTAGTATTTGGGGTTTCATATCTGAACTAAAGTTACTGTCTTTGAACCCAAACGAGGAGTTTGTTGCTGTGGTTCCTTAAAGGGACTATAATG ATTTCGGGTGGAAACCTTGGAGAGAGTTGCAGTCGAGTCGGAGTTCGGACAATTACTTGTCTGCGAAAAAGCTATGGATGGTGATCGGAAAACCCCCGAT CCATCTGATTATCCTATAGATGGTGCTCAGAAAGTTAGATCATTGCACGGGAGGACTAGTGGCCCTACAAGGCGTTCTACAAAGGGGCAATGGACGTCCG AGGAGGATGACATCTTGAGGAAGGCTGTTCAGCGATTTAAAGGAAAGAATTGGAAAAAAATAGCTGAGTGTTTCAATAATAGAACTGATGTACAATGCCT ACATAGGTGGCAGAAAGTTTTAAATCCTGAGCTTATCAAAGGTCCATGGTCTAAAGAGGAAGATGAGGTGATTATTGAACTGGTGAACAAATATGGCCCT AAAAAATGGTCTACTATTGCACAACATTTACCTGGACGTATTGGTAAACAATGTCGAGAAAGGTGGCATAATCATCTTAATCCGGCTATAAACAAGGAAG CATGGACACAGGAAGAGGAGTTAGCTCTAATACATGCTCATCAGATTTATGGGAACAAATGGGCGGAATTAACGAAGTTCTTGCCTGGAAGGACCGACAA TGCTATTAAAAATCACTGGCACAGTTCTGTAAAAAAGAAATTGGATTCTTACTTGGCGTCGGGCTTGCTTAATCAATTCCAATCTGTACCTCATGTGGGA AATTCAAATCAATCGATGGTTATAGGCTCTTCGAGCTTGCAGTGTGGAGATGGTAATGATTCAAAGCAGACAGAAGGAGAAGAAGTTTCGGAGTGTAGCG AGTCAGCTAATGGTGGTCATTTTCCATCAGCAAGAGAGATGAGCAATGCTGGCTTACAAACTAGAGAGGACTACAGAGCAAATGAAGATTCTAGTCATGG AAAGGATCATAGTGCATATCAAGCATGCTGTTCAGAGCCATATTATGTGTCTCTTGATGATGTTACTATATGCGACCCAGACATTACTCGCCAAGACGCT CACGCTTCTCAATTTATTGAACATAAATTCTCACATGAATCTGGAATTTCTATTAGCAGGGATGGTCAATTTAATTTTCATTCCTTCCCCAATATTTCAT CAGAGGGCTTGGCGCAGAAATCCTCAAAATTGCAAAGCAACTGTGTAGCTCCTAGTGAAATCTGCGACTATGTTCCGTTTCAAACTTCAGGGAGGTTAGC TGTTTCTACATCCACGGGACCTACTTCTACACATTCTGTTAGACCAGAGCCCATGTTGATATCTGATGATGAATGTGGCAGAGTCCTTTTCTCAGAGGCA GGGAACGACACAGGCTTTTGCTCCGGAGATAATAATGGTGTAGATTTTGTCGACTTTTCTGGATATACTTCATTTCTTTCCCAGTCGTGTGATATCCATA TGTCTGAAACCGGTGGAACTTCAACTTCACAGCAAAGTTGTCCTCCCTGTTCTAATACTTTTAATACTTCATCCTCTCAATCTGTGCCACCAGTACTTTC TTCTAGTGGCCGCTGTCTGGTTTTTACTGCCAATGATAATCAATTATTTGAGCCGGAGGATCAGCAGATTGTTTCTGGTGCACCTGATAATTTTGTTTAT GCCAATGACATGTCCAGTTCTCCCCGTGTTGATGGTATAGATAGTGCAGTAATGCAAAAGGCACCAGATATTGTGAAGGATACTTCAAAGCTGGTCCCTG TAGATAGGTTTGGCTGCGCATCAGGATCTATGCAAACTTGTTATCCGACAGATGAAAAGCCAACCACACATATAAACAAGGAGGGTGGGGGAGCTCTATG TTATGAGCCTCCTCGTTTTCCAAGCTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGGGCTGATATGCTGCAAGAATTTAGTCCCCTTGGT ATCCGCCAGTTTATGATGTCATCAATGAACTGTCTGACACCTTTCAGGTTGTGGAGCTCACCCTCTCGGGATGATAATCCAGATGCATTGTTGAGAAGTG CAGCCAAAACTTTCACGGGCACCCCATCCATACTAAAGAAACGTCGCCATTGCCTGTTGTCACCACTGTCAAATAAAAGAATTGGCAAGAAACTTGACGC TGACATGGCAGCCACACAGACCAAAAATTTTCCCAGCTTGGAAGGCATCTTTAATGGTAATGAGATTTCGGAAGTAGATATGCTTTCTCCAACTGTAATG GAAAAAAGGAACTCTAATCTGGCAGTTGATGTTGATAAAGAAAATTGTGGACCAGCCTTCAAAGGGGAACAAGTGGATGAGAAATTGAAATCTGCAATTT TGGACAAAATGAATTCAGAAAAAGTTACCATTGACAGTAACTCTGAGGATAAAATTAAGCAGCGGCCTCTTGATATTGATGCTAAAATGAAGACCGTTGT TGATGCTGCTGCTGATATTGTGCGACAACCTTCCGGAGTTTTGGTTGAACATGATATAAATGACCGGTTGCTGTTCTCTCCTAATCAAGTTGGTTATAAG TCAGACAATGTTCTGGGTTCAAGTGCTAGAACTCCCAAGAAGTTGGACGATGAGAGTTTGGAAGAAGCTTCAAATCAGAGCATCCCTTTGAAATTAGCAT CTGAAAAACCATGCCCAAATGTTAACTCTCCTTTTGTTCATGCAAAGGAGCATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAATCCGTCTGTTCATC AACCCCAGGGGAGAACTCACGGTATCAAACCAGAATCGATGGTGCTTTTGAAACTAGTAACATATTTGCTTCAACACCTTTCCGGAAAAGCCTTGAGTCA CCTTCTGCATGGAAATCTCCCTGGCCCTTCAACACTCTTCTGTCCAGCCCCAGATTTGATACCGAACTTACAATTGAGGATTTTGGGTTTTTAATGAGCC CGGGTGGTAGAAGCTATGATGCAATCGGATTGATGAAACAAGTCGACGAACAAACTGCTGCCACATATGCCAATGCTCAGGAGATTTTGAGAGATGAAAC TCCTAAGGTGTTGAAGAAAGAGACATTTGGAAACAAGGATGGGGACGAGGAAAACAATGATATATGCAAACAGGCCGGGAAAGTTTCTCAATTGGGTTCA AATTCTTTGGTAAAGTTTGATTTACATAACACTCCTGATCCTGCCAACATATTTTGTTCCTCCTTTCCTTCCCTTAGTTCTTGCAACATAGTTCGATTTT TTCATGTTACATGACAAAAACCTGTTATCAAAGTAAGAAAGTAGTTTCTTAATTGAACTTAGTGTCTTGCTAACGAGTGCGCTAAGGGCGTTTGTCTAGG AATCTAAAAATAGAAAGTTATAAACATTGCATTGGAAATCAAAGCCTTCTAAACTTTTTAATCTATTTCAATATACCATTTTCCACTGCAAGGTTTCTAT CTTTGATTCCATAACAAATACACTTAGGAGTTAGGACACTTGTTAGTGTTCTCCGAAAACTTAAGTGATTTGTTGCGTTTCTCGTTCGCATCCATGTAAT ATGAGAGAATCCTATCCCCAGGATGAGTTTTCTTAATCAGTTTCCACTAAACTGCACTGAAGATGATTGGATCAAATATATGTGTATATATGTTTATAAG CCTCTTTCTTCCTTTGTTTTTTTTCTTGTTGGTCAAGTCTTGTATTTTCTATTTTTACCAATAACTTGTAGCTGAATGGCATTTTTTTCCGGCAGATGGA GCGACGAATACTCGACTTTAGTGACTGTGGAACACCAGGCAAGGGGGGTGATAACAGCAAATCCTCCTCAGCTATGAACTTCTCAAGTCCTACTTCATAC TTGCTGAAAGGTTGCAGATAGCTGATTGCCAATTATAGCTAAAATCTCCAGATTTTTGGACTCTGAATTTCATGTTTTAATATAAATACTATAAATACAC ATATGCATAGTATATGCCATTTTTCAGATTTTTTGTTTTGACTTCTACAGTGACAAGACTTGTTGTAATTGGAATTAAAAATGTTATTTAACATTTTTTA TATAAATTAATAATCAAACAACTCTTCATAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_70503; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149983
Blastp | Transcription factor MYB3R-4 from Arabidopsis with 39.6% of identity |
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Blastx | Transcription factor MYB3R-4 from Arabidopsis with 39.25% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT5G11510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447482.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |