| Id Trinity | FTRINITY_DN57656_c1_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_149143 |
| Sequence | CAAAATTTCTCTCTAAAAAAAGAGGTTTTTTTCTTCCCGAAATTGTATGAACCTATAAATGGAGCAAATTTAATGGAAAATTTGAAAATGTCCATAATTG GGAAACATGGAAGCATTGCCATCTGCGTCAATAGCACAACAAACATGGGAATTCGAAAACAACATCATCCCAATAGACACTCCTTCTTCAACCACCAACG CCGACGATTCCATCTTCCACTTCGATGAAGCTTCTCAGAACCAATTCCACCGCCAAAGACCTTGGATCAACGATCCTCACTTTTTCAAACGCGTCAAGAT CTCCGCACTCGCTCTCCTCAAGATGGTTGTTCACGCGCGCTCTGGTGGCACCATTGAAGTTATGGGTTTAATGCAAGGGAAGACAAATAAAGACTCAATT ATTGTCATGGACGCTTTTGCCCTTCCCGTTGAAGGTACTGAGACTCGTGTTAATGCTCAAGCTGATGCGTATGAGTATATGGTTGATTATTCTCAGACCA ATAAGCAGGCAGGGCGGTTGGAGAATGTCGTGGGATGGTATCATTCTCATCCTGGTTATGGATGCTGGCTCTCTGGTATAGACGTGTCTACACAGATGCT GAACCAGCAGTTTCAGGAACCCTTTCTGGCTGTTGTGATTGACCCAACCAGGACTGTTTCTGCTGGAAAAGTTGAGATTGGGGCATTCAGAACCTACCCT GGTGATTATAAGCCTCCGGATGATCCTATTTCTGAGTACCAAACCATACCTCTCAATAAGATTGAAGACTTTGGTGTCCATTGTAAACAGTATTATTCTT TGGATATCACTTACTTTAAGTCTTCCCTTGACTCACACCTGTTGGATTTGCTATGGAACAAATATTGGGTCAATACACTATCATCTTCTCCTCTAATGGG TAATGGAGACTACTTTGCTGGACAAATCTCAGATTTAGCTGAAAAACTAGAACAAGCAGAGAACCAGTTGGCCCATTCGCGCTTTGGATCACTAATAGCT CCTTCTCCTAGAAAGAAAGAAGAAGAATCTCCACTTGCTAAGATTACTCGTGATAGTGCAAAAATTACTGTGGAACAAGTTCATGGTCTTATGTCGCAGG TAATCAAGGACATTCTGTTCAATTCTTCTCATCAAACAAACAAGTCTCGCGCAGAAACATCCGGCCCTGAACCAATGATTGAGAGCTGATTCTGGTATCA ACTAGACATGAATTTATATTACAATTCAATTTTCTTTTTGGTGATGTATTCATCCGCGGCCGCCTGCATTACATTTAGCAGATTGACATTACATCTAATT TTGAATTTTGCTCTTTTTAATATGCCCTGCTGTATATCCTTGTTTTATTTCACAAGAACATGTGAGAACTGTCAACCGGACAATCCACATAAGAGGCTCA TTCATCTAACACAATTGAACTGCTGGTCAATGTAAAACTTATTATACACTTGTCCATTGATTTGCATTGCTTGATGCACTTCAGATTCATTTTCTTGCAG TTAATGTTTGGTGGATATGGCTATCTAAAGTGACCAAGTATGGTTGTATTCACATTTAGATCATTCAGTGAGTGTAGTTCTTAATGCAGTTTATTATATT GGAGGTGAATACAGTGTTGCTCATTTTAGAGATTTTTGAAAGGTGGTTCATTGTTTCAGTCTTTGGTTCTAGATTGGATGCAAACTACTGTAATCAACTT AATAGATTTTTAAATTCTTGTGAATTTGAGGTGTTCTTTTTCCAAATAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70511; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149143
| Blastp | COP9 signalosome complex subunit 5a from Arabidopsis with 80.39% of identity |
|---|---|
| Blastx | COP9 signalosome complex subunit 5a from Arabidopsis with 80.39% of identity |
| Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310) |
| Kegg | Link to kegg annotations (AT1G22920) |
| CantataDB | Link to cantataDB annotations (CNT0000267) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438349.1) |
| Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (PF01398.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |