| Id Trinity | FTRINITY_DN57682_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_149746 |
| Sequence | CTCTTATCCATATTTTCCATACTTTTTTCATTTCTTATGTGTAGAGTATATATTAGTTTTATTTATTTGTTTTGTGTGTGATAGTGTATTTTGCATATTG ATTGTATAACAGTGTGATTGTTTTTTGCCTGTGCAAAATCGAAGTGATAGAGTTCTTTTTTTCATACTTGGTATGCTGCAACTTTTACTCAATCTTAGTT TATTTTGTTGGAATGTAATTCGGTGGTTCAGTTGTTTATTTTATTTGAAATTGTTTTGTTAAAAATTAAAGATGTTCTTTCTCTTATGTCGAGCATTGTT CTTTTAGGGCATATTTGCGAGTTGGTTTCTAAAAGTGAAAAGAAGTCTTGGGTACCCTCCCACAAGTGTAATGGTTCCCAAAGCCTTTCCCTTTCCAGAA AAAAACCAACTCGCAAAGAACCTCTAACTAAATTGTGGTTCCTTAGAAGTGCAAGGTTTAATAATGATGTTCTGAATAATCATAAACGTGTAGGTCACCC ATTAGACAAAAAATAAAATGAAATAATGGCCTCACTGTGTCTCATGTATATATGATGGATTCTCTGATAGGTTCCTATGGGTCTACACTACGATACAAGA GCATTGAGCGCTTGAAGCCTATTGGGAAGCATTCCCTTCTCGGTGCAAGTGGGGAAATAAGTGATTTTCAGGAGATTCTACGCTACCTTGACGAACTTAT CCTTTATGACAACATGTGGGATGATGGAAATTCTCTAGGGCCTAAGGAGGTGCACAATTATTTGACTCAAGTGATGTATAACAGGCGGAACAAGTTCAAC CCTTTGTGGAACTCCCTAGTGCTTGGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACAGTTAACATGATTGGGATTAATTATGAAGACAATCATGTAG CCACTGGGCTAGGAAACCATCTTGCTAGGCCAATTCTCCGTGATGAGTGGCATGAAAATTTGACCTTTGAAGATGCTGTCAAGTTGCTGGAGAAATGCAT GCGTGTGCTTTTGTATCGTGATAGGTCTGCTGTCAACAAGATACAGGTTTTATTCTTTTTCCTTTTTCCTATTTCACCATGTTCCCTCCAATAGCATAGG AATGAAATGTGTACCTAAATCTTAAGAAAGCTGCAATGGTGCATAATCCATATGGATGTTGTATGCTCCCGACTTTGGTCTACATGAAAAAAGTGGCATG CAGAATGAATTGAAGTATCATCATAAAAAGTGAATTCAAAATTCACAAATAAATTTTGACAAGTTTTGGACTTTTGGGTTACCAATGAAATTTGGGTTGA ATAATGATTGGTTTCTGGTTGGATTTGTTCCATAGGTCTCAGTTTCTTCTGCTGGCACAGGCCAAATAACTTTTAAGGCAATTTAAGTAGTGGGGGCTAG TAAGCTCTAAATCTCATGGTACCTAAATGACTAAGTCTTTAAGTGACCCTTTTTGCTTGGGATTGTACCCTCCTTTCTCTAAATCCTATGATGGCCACTT GGCACAAAAAGGTAAAGAAGTTGAAATTTTTTAGAAGGCAGATACCCTTACTTATCTTATGTGGAATTACTTAGTATGTTTTGCCTGGTATGGTTAGAAT TATTTAATCTGGCCAGCTTAGCTCATCATAGCATAGAATAGAGTCAAGGATTAAAGGTGTTATCTTAGCTAGAACAAGCTTGTAGTGCATATTGACAGGA AAGAGGGGAAAGGGTATATTTGATATAATAATATAGCTATTAGTTTGTGGTTTGTTTCCTTTATGTGGATGCACAGGGGAACCAAAGTAAGATCTTAAAT TTACTTGTTACAAATAATATCAGTACTCGTACAGTCTTGCTTATTACCCAGTTATGGGATTATAGAAAAGAAATGCATTGCCAATGAAGTAGCTCAACTG GCACTGGCCCAATTCTTATAGACTAGGATGTGATGTTGATTGTGAGGTTTGATTCGTCATCGGTCCACCTTTTCTAATCCTCCACTTAGTTGCTTTCACC TCCTAACCAGCCAAAATGAAAACGAATCCATATAAATGAGTTATTTACAAAACTATCTGGAAGACGAGAGCACCTAGAACTAGATGATTATTTTTGTCAG TTCCTACTTCCCTGACATTATGACACCCAAGGTGCAATACTTTCAAGGAATTGTTCAATATACAAGCATGTTCATATTTTCTCATCAAGGTGCAAATGTA TCATTTCTTTGCTTTTGCCTTCTGTTTAGTCTTGTTGGTGATCATTATGACAGCTAACCACACATTGCTTCTTATTTTATATGCCGTGGTGCTAGGAATG TACTAAATTGCAGGGAGGGTTTATTGCACCCTTTCTATCGCATGTATATCACACCTAGATCTGACTCGTCTTCCTTCGTACATTTTTATATTCTTATAGT TTTGATTGAATTGCCAATTGCATGGATGATTGGGTTATCATACTTAGTGAATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGAAGGTGCTA CCTTGTTCCCACCATTCTCATTGAAAACACACTGGGAGTTCTCTGCTTTCAGGAATCCAACAGCAGGTGCTGAAGGTTCATGGTAGGTTGATGGGCATGG AATCAAATGAAACTGAAATGTTGAATGGATATTAAATCTTTCCAATTCCAAAGGGTACTTTCATGGTGTTAAATGGATATGGAGTGAAATAACTGATGTG GGTTTATGTTTTCAGTAAAGTTTTTATTAATTGACTTGACATCTCTTCCAGAGTAATGGTAGTTCATCTAGTTAGAAGAAAACTACCAGAATTTTAATTT AACATCTTCAGTTTAGTCGCAGCTATTTGTGTTTAAGCCTGAATGGATGGTAAATGTTGTGTTAGACGGTCCACCCCAACATAAAACTGTCAAATTTTTA TGAGGGGATCTATTTACTTCAAGAGTAAGTTAAAAAAACATTCTCCATATATTAGTCGTCTATTCTCCAAATTATACTTATTAATTCAAATAATTGGATT TTTCTAAAACGAACGACAAATATGTGAGAGTATGTTTTTTTGAGACCAAGCATGCCTATTTCTACCCAAAGTCAATATGCACTAGCATACAGGTCTTCTG GTGTGAGGAGTGTCTTTGCCCTTTGGAATGAGGATCTCATGTCATCAAATATGTTCCAAATCATATACCAAACCAATTAGAATAAAGAAAAAATAAATAA AAATATAAATATTTAATTTTTTTGACTAATGTGACATATTGTTATTAATTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149746
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 82.53% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 82.14% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448711.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |