| Id Trinity | FTRINITY_DN57682_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_149762 |
| Sequence | CTCTTATCCATATTTTCCATACTTTTTTCATTTCTTATGTGTAGAGTATATATTAGTTTTATTTATTTGTTTTGTGTGTGATAGTGTATTTTGCATATTG ATTGTATAACAGTGTGATTGTTTTTTGCCTGTGCAAAATCGAAGTGATAGAGTTCTTTTTTTCATACTTGGTATGCTGCAACTTTTACTCAATCTTAGTT TATTTTGTTGGAATGTAATTCGGTGGTTCAGTTGTTTATTTTATTTGAAATTGTTTTGTTAAAAATTAAAGATGTTCTTTCTCTTATGTCGAGCATTGTT CTTTTAGGGCATATTTGCGAGTTGGTTTCTAAAAGTGAAAAGAAGTCTTGGGTACCCTCCCACAAGTGTAATGGTTCCCAAAGCCTTTCCCTTTCCAGAA AAAAACCAACTCGCAAAGAACCTCTAACTAAATTGTGGTTCCTTAGAAGTGCAAGGTTTAATAATGATGTTCTGAATAATCATAAACGTGTAGGTCACCC ATTAGACAAAAAATAAAATGAAATAATGGCCTCACTGTGTCTCATGTATATATGATGGATTCTCTGATAGGTTCCTATGGGTCTACACTACGATACAAGA GCATTGAGCGCTTGAAGCCTATTGGGAAGCATTCCCTTCTCGGTGCAAGTGGGGAAATAAGTGATTTTCAGGAGATTCTACGCTACCTTGACGAACTTAT GTAAGCCCTGGTTATTTCTCGCCGGGGAAAGCCAGAAGAACCTTCTTACTTGAATTGTTTGCATTTCATTGTCTCTGGTGATTGGTTATTTTTCTTTCTT TCAAACTTCAAGGAAATTATTCCATTTGCATAGCCCACTTCCCATCCATTTCAGATTTGATTACTTAAATGTTTATGTGTAACTTTTGATTTTGAGTTTT GACTGTTGCAGCCTTTATGACAACATGTGGGATGATGGAAATTCTCTAGGGCCTAAGGAGGTGCACAATTATTTGACTCAAGTGATGTATAACAGGCGGA ACAAGTTCAACCCTTTGTGGAACTCCCTAGTGCTTGGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACAGTTAACATGATTGGGATTAATTATGAAGA CAATCATGTAGCCACTGGGCTAGGAAACCATCTTGCTAGGCCAATTCTCCGTGATGAGTGGCATGAAAATTTGACCTTTGAAGATGCTGTCAAGTTGCTG GAGAAATGCATGCGTGTGCTTTTGTATCGTGATAGGTCTGCTGTCAACAAGATACAGGTTTTATTCTTTTTCCTTTTTCCTATTTCACCATGTTCCCTCC AATAGCATAGGAATGAAATGTGTACCTAAATCTTAAGAAAGCTGCAATGGTGCATAATCCATATGGATGTTGTATGCTCCCGACTTTGGTCTACATGAAA AAAGTGGCATGCAGAATGAATTGAAGTATCATCATAAAAAGTGAATTCAAAATTCACAAATAAATTTTGACAAGTTTTGGACTTTTGGGTTACCAATGAA ATTTGGGTTGAATAATGATTGGTTTCTGGTTGGATTTGTTCCATAGGTCTCAGTTTCTTCTGCTGGCACAGGCCAAATAACTTTTAAGGCAATTTAAGTA GTGGGGGCTAGTAAGCTCTAAATCTCATGGTACCTAAATGACTAAGTCTTTAAGTGACCCTTTTTGCTTGGGATTGTACCCTCCTTTCTCTAAATCCTAT GATGGCCACTTGGCACAAAAAGGTAAAGAAGTTGAAATTTTTTAGAAGGCAGATACCCTTACTTATCTTATGTGGAATTACTTAGTATGTTTTGCCTGGT ATGGTTAGAATTATTTAATCTGGCCAGCTTAGCTCATCATAGCATAGAATAGAGTCAAGGATTAAAGGTGTTATCTTAGCTAGAACAAGCTTGTAGTGCA TATTGACAGGAAAGAGGGGAAAGGGTATATTTGATATAATAATATAGCTATTAGTTTGTGGTTTGTTTCCTTTATGTGGATGCACAGGGGAACCAAAGTA AGATCTTAAATTTACTTGTTACAAATAATATCAGTACTCGTACAGTCTTGCTTATTACCCAGTTATGGGATTATAGAAAAGAAATGCATTGCCAATGAAG TAGCTCAACTGGCACTGGCCCAATTCTTATAGACTAGGATGTGATGTTGATTGTGAGGTTTGATTCGTCATCGGTCCACCTTTTCTAATCCTCCACTTAG TTGCTTTCACCTCCTAACCAGCCAAAATGAAAACGAATCCATATAAATGAGTTATTTACAAAACTATCTGGAAGACGAGAGCACCTAGAACTAGATGATT ATTTTTGTCAGTTCCTACTTCCCTGACATTATGACACCCAAGGTGCAATACTTTCAAGGAATTGTTCAATATACAAGCATGTTCATATTTTCTCATCAAG GTGCAAATGTATCATTTCTTTGCTTTTGCCTTCTGTTTAGTCTTGTTGGTGATCATTATGACAGCTAACCACACATTGCTTCTTATTTTATATGCCGTGG TGCTAGGAATGTACTAAATTGCAGGGAGGGTTTATTGCACCCTTTCTATCGCATGTATATCACACCTAGATCTGACTCGTCTTCCTTCGTACATTTTTAT ATTCTTATAGTTTTGATTGAATTGCCAATTGCATGGATGATTGGGTTATCATACTTAGTGAATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGA AGAAGGTGCTACCTTGTTCCCACCATTCTCATTGAAAACACACTGGGAGTTCTCTGCTTTCAGGAATCCAACAGCAGGTGCTGAAGGTTCATGGTAGGTT GATGGGCATGGAATCAAATGAAACTGAAATGTTGAATGGATATTAAATCTTTCCAATTCCAAAGGGTACTTTCATGGTGTTAAATGGATATGGAGTGAAA TAACTGATGTGGGTTTATGTTTTCAGTAAAGTTTTTATTAATTGACTTGACATCTCTTCCAGAGTAATGGTAGTTCATCTAGTTAGAAGAAAACTACCAG AATTTTAATTTAACATCTTCAGTTTAGTCGCAGCTATTTGTGTTTAAGCCTGAATGGATGGTAAATGTTGTGTTAGACGGTCCACCCCAACATAAAACTG TCAAATTTTTATGAGGGGATCTATTTACTTCAAGAGTAAGTTAAAAAAACATTCTCCATATATTAGTCGTCTATTCTCCAAATTATACTTATTAATTCAA ATAATTGGATTTTTCTAAAACGAACGACAAATATGTGAGAGTATGTTTTTTTGAGACCAAGCATGCCTATTTCTACCCAAAGTCAATATGCACTAGCATA CAGGTCTTCTGGTGTGAGGAGTGTCTTTGCCCTTTGGAATGAGGATCTCATGTCATCAAATATGTTCCAAATCATATACCAAACCAATTAGAATAAAGAA AAAATAAATAAAAATATAAATATTTAATTTTTTTGACTAATGTGACATATTGTTATTAATTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149762
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 83.04% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 80.17% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448711.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |