| Id Trinity | FTRINITY_DN57682_c1_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_149777 |
| Sequence | CTCTTATCCATATTTTCCATACTTTTTTCATTTCTTATGTGTAGAGTATATATTAGTTTTATTTATTTGTTTTGTGTGTGATAGTGTATTTTGCATATTG ATTGTATAACAGTGTGATTGTTTTTTGCCTGTGCAAAATCGAAGTGATAGAGTTCTTTTTTTCATACTTGGTATGCTGCAACTTTTACTCAATCTTAGTT TATTTTGTTGGAATGTAATTCGGTGGTTCAGTTGTTTATTTTATTTGAAATTGTTTTGTTAAAAATTAAAGATGTTCTTTCTCTTATGTCGAGCATTGTT CTTTTAGGGCATATTTGCGAGTTGGTTTCTAAAAGTGAAAAGAAGTCTTGGGTACCCTCCCACAAGTGTAATGGTTCCCAAAGCCTTTCCCTTTCCAGAA AAAAACCAACTCGCAAAGAACCTCTAACTAAATTGTGGTTCCTTAGAAGTGCAAGGTTTAATAATGATGTTCTGAATAATCATAAACGTGTAGGTCACCC ATTAGACAAAAAATAAAATGAAATAATGGCCTCACTGTGTCTCATGTATATATGATGGATTCTCTGATAGGTTCCTATGGGTCTACACTACGATACAAGA GCATTGAGCGCTTGAAGCCTATTGGGAAGCATTCCCTTCTCGGTGCAAGTGGGGAAATAAGTGATTTTCAGGAGATTCTACGCTACCTTGACGAACTTAT GTAAGCCCTGGTTATTTCTCGCCGGGGAAAGCCAGAAGAACCTTCTTACTTGAATTGTTTGCATTTCATTGTCTCTGGTGATTGGTTATTTTTCTTTCTT TCAAACTTCAAGGAAATTATTCCATTTGCATAGCCCACTTCCCATCCATTTCAGATTTGATTACTTAAATGTTTATGTGTAACTTTTGATTTTGAGTTTT GACTGTTGCAGCCTTTATGACAACATGTGGGATGATGGAAATTCTCTAGGGCCTAAGGAGGTGCACAATTATTTGACTCAAGTGATGTATAACAGGCGGA ACAAGTTCAACCCTTTGTGGAACTCCCTAGTGCTTGGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACAGTTAACATGATTGGGATTAATTATGAAGA CAATCATGTAGCCACTGGGCTAGGAAACCATCTTGCTAGGCCAATTCTCCGTGATGAGTGGCATGAGAATTTGACCTTTGAAGATGGCATCAAGTTACTG GAAAAATGCATGCGCGTGCTTTTATATCGTGATAGGTCTGCTGTCAATAAGATACAGGTTTTGTTCTTTTTCCCTTTTCTTGTTTCACCCATGTTCCCAT CAATACAGCAGATGGGTGAAATGTCTAGCTAAATCTTTAGAAAGCTGCAAGGGTGCAAAGTCCATATGGAGGTTGTATTCTCCCTACTTTGGTCTAAATA AAAAAACGTATACAAAAGAATTCAAGGCCTCGTCATAAAAAAGTTAATAAAAATTTCATAAAATTCTAATATAAGTGAAGCTTCATTGTCTTAAACCTAT AGTTTTTTGGTGCATACTTTCGTCAGCACTGCATGCTCATCTCCCTTTCATTTTGCATTGTTAGATCTCTAGTCAAATTCACAATTTATGCATCTTTCAA AATATTTCCATAACTATATTAGTTTTGGACTTTTAGGCTATCAATGAAATTTAGGTTGAAACTTGATTTTTTTCCTTGGTCTCTGTTTGGTTTTATTCAG TAGTTCCTAGTTTCTTCTGCATTACTGTCATTATTTAGAAAACCATACTTATTTATCGGTTAAAGGCTTTAGATTCAAAATTTTACCCATTGAGAACTAT ATGGCTTTCTTATAAAAAAGAACCACATGGCATTTGGCACAGGCCAAATAATTTGTAAGGCAGTTTAGGTGGTGGGGGCTGTAAGCCTTAACTCACAATC GTACCTAAATGTTTAAGTAACCTTTTTATTTGGTATTATATCCTCAATTCCTCATGAGGTCTAATCCCCTGATCCTCACTTGGGGCAAAAAGATAAAGAA ATTTGGAGGTTTTTAGAAGGCAGATAACTTAATTATTTTCTGTGTAATTGCTGAGTCTGTTTTGCTTGCAAATGTTGGAATGATTTATAATCTAACATAG CATATAATGAAGTCTTAACCATAGAAAGATTGAAGGCAATATCTTAGAAGCTTGTACTGCATACTGACATGAAAGAAGGGAAAGGGAATATTTGATATAA TAATGTGGCTATCAGTTTGTGATTTTTTTCCTTTCAGTACTTACTTATTACCCAGACATGGAATCATTAAAAAAAGAATGTGTTGCCATTTGCCAATGAA GTAGCTCAACTGACACTAGCCCAATTCCCAATCCTCCACTCAGCTGCTTTAACCTCCCAAACAACCAAAATTAAATAGAATCCATATTAATGAGTTATTT AGTATTTACAATAGTAACTGGAAGATTAGAACGTCCAGAAAAATATGGTTTTCTGTCAGTCCCTATTCCCCAGCCAAATCCCTGTCTAAAGGCCTTGTTT CAAGGAGTTGTTCAAATATACCAGTTTGTTGTCTTCTGTTCAGTATTGGTGACCATTATGACAGCCAACTACACATTACTTTTTTTATATGCTGTAGGAA TGTTAAGGTACTAAATTGCAGGGAGGGTTTGTTGCACCCTTTCTGTCATGTGTTTATCACATCTAGATCTGGCTTTTCTTCCCTCATACATTTTTTAGAT TCTGGTAGTTTTAGTTTTAATTGAGTTGTGTGAGTGATTCCGTTATCATACTACGTGGATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGA AGGTGCTACTATGTTCCCACCATTCTCATTAAAAACAAATTGGGAGTTCTCTGCTTTCAGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149777
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 83.04% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 80.17% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465136.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |