| Id Trinity | FTRINITY_DN57682_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_149747 |
| Sequence | AAAGCCCATATTAAATTTCGTACGAAAAAAGAAAGTGAGAATTTCCCTGTTCTTTTTTTATTTCTTTTACGAGAACTGTTGTTTTCTTGAACAAAGGGCA AAGGAAGAAGAAACACATAAAAGCAAAAAAACGAAAGCGTTTTTCAGAGTAACACATTCTTCAATCACTCCACTCTTATACACTCTTCAATTTACAAATC GCTCCAATTGTGTTATGATGGAATCTGTAGCTGAAACACAACGAACTATGTACCCTTATGTAACTGGATCCTCTGTCGTCGCAATTAAATACAAAGATGG GATTTTAATGGCTGCTGATATGGGAGGTTCCTATGGGTCTACCCTACGATACAAGAGCATTGAGCGTTTGAAGCCTATTGGAAAGCATTCCCTTCTCGGT GCTAGTGGGGAAATAAGTGATTTCCAGGAGATTCTACGCTACCTCGATGAACTCATTCTTTATGACAACATGTGGGATGATGGGAATTCTCTAGGGCCTA AAGAGGTGCACAACTATTTGACTCAAGTTATGTATAATAGGCGGAACAAGTTCAACCCTTTGTGGAACTCCCTCGTGCTTGGTGGTGTGAAGAATGGACA AAAGTACCTTGGCACAGTTAACATGATTGGGATTAATTATGAAGACAATCATGTAGCCACCGGGCTGGGAAATCATCTTGCTAGGCCAATTCTCCGTGAT GAGTGGCATGAAAATTTGACCTTTGAAGATGCTGTCAAGTTGCTGGAGAAATGCATGCGTGTGCTTTTGTATCGTGATAGGTCTGCTGTCAACAAGATAC AGGTTTTATTCTTTTTCCTTTTTCCTATTTCACCATGTTCCCTCCAATAGCATAGGAATGAAATGTGTACCTAAATCTTAAGAAAGCTGCAATGGTGCAT AATCCATATGGATGTTGTATGCTCCCGACTTTGGTCTACATGAAAAAAGTGGCATGCAGAATGAATTGAAGTATCATCATAAAAAGTGAATTCAAAATTC ACAAATAAATTTTGACAAGTTTTGGACTTTTGGGTTACCAATGAAATTTGGGTTGAATAATGATTGGTTTCTGGTTGGATTTGTTCCATAGGTCTCAGTT TCTTCTGCTGGCACAGGCCAAATAACTTTTAAGGCAATTTAAGTAGTGGGGGCTAGTAAGCTCTAAATCTCATGGTACCTAAATGACTAAGTCTTTAAGT GACCCTTTTTGCTTGGGATTGTACCCTCCTTTCTCTAAATCCTATGATGGCCACTTGGCACAAAAAGGTAAAGAAGTTGAAATTTTTTAGAAGGCAGATA CCCTTACTTATCTTATGTGGAATTACTTAGTATGTTTTGCCTGGTATGGTTAGAATTATTTAATCTGGCCAGCTTAGCTCATCATAGCATAGAATAGAGT CAAGGATTAAAGGTGTTATCTTAGCTAGAACAAGCTTGTAGTGCATATTGACAGGAAAGAGGGGAAAGGGTATATTTGATATAATAATATAGCTATTAGT TTGTGGTTTGTTTCCTTTATGTGGATGCACAGGGGAACCAAAGTAAGATCTTAAATTTACTTGTTACAAATAATATCAGTACTCGTACAGTCTTGCTTAT TACCCAGTTATGGGATTATAGAAAAGAAATGCATTGCCAATGAAGTAGCTCAACTGGCACTGGCCCAATTCTTATAGACTAGGATGTGATGTTGATTGTG AGGTTTGATTCGTCATCGGTCCACCTTTTCTAATCCTCCACTTAGTTGCTTTCACCTCCTAACCAGCCAAAATGAAAACGAATCCATATAAATGAGTTAT TTACAAAACTATCTGGAAGACGAGAGCACCTAGAACTAGATGATTATTTTTGTCAGTTCCTACTTCCCTGACATTATGACACCCAAGGTGCAATACTTTC AAGGAATTGTTCAATATACAAGCATGTTCATATTTTCTCATCAAGGTGCAAATGTATCATTTCTTTGCTTTTGCCTTCTGTTTAGTCTTGTTGGTGATCA TTATGACAGCTAACCACACATTGCTTCTTATTTTATATGCCGTGGTGCTAGGAATGTACTAAATTGCAGGGAGGGTTTATTGCACCCTTTCTATCGCATG TATATCACACCTAGATCTGACTCGTCTTCCTTCGTACATTTTTATATTCTTATAGTTTTGATTGAATTGCCAATTGCATGGATGATTGGGTTATCATACT TAGTGAATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGAAGGTGCTACCTTGTTCCCACCATTCTCATTGAAAACACACTGGGAGTTCTCT GCTTTCAGGAATCCAACAGCAGGTGCTGAAGGTTCATGGTAGGTTGATGGGCATGAAATCAAATGAAACTGAAATGTTGAATGGATATTAAATCTTTCCA ATTCCAAAGGGTACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149747
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 84.29% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 84.29% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465136.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |