| Id Trinity | FTRINITY_DN57682_c1_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_149783 |
| Sequence | TTTCAGAATTATAATTTTCCTATATAACATCTATCACCCTCGTTGTCACTTATTGTTTACTAAAAAAACAAAGGAAAAATATACTACCTCGATTTATTAA TTTATTTAATCACGAAAAATTGTTCTCTTGAACGAAGGTAGAAAAAGAAGAGATCCCACAACAAAAAATAAGTGTTTTTTCAGAGGTCACCGTTGTTTGC AATTGTTGAATTTACAAATCGCTTTTCTTGTGTTGCGATGGGTTCTGAAGCTGAAACACAGAGAACTTTGTACCCGTATGTGACAGGATCCTCTGTAGTT GCAATCAAATACAAAGATGGGATTCTCATGGCTGCTGATATGGGAGGTTCTTATGGGTCCACCCTACGCTACAAGAGCATTGAGCGTTTGAAGCCTATTG GGAAGCATTCCCTTCTTGGTGCAAGTGGGGAAATAAGCGATTTTCAGGAGATTCTACGTTACCTTGATGAACTTATCCTTAATGATAACATGTGGGATGA TGGGAATTCTCTAGGGCCTAAGGAGGTGCACAACTATTTGACTAGTGTGATGTATAATAGGCGGAACAAGTTCAACCCTTTGTGGAACTCCCTTGTGCTT GGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACGGTTAACATGATTGGTGTTAATTATGAAGACAATCACATAGCCACTGGGCTGGGAAATCATCTTG CTAGGCCAATTCTCCGTGATGAGTGGCATGAAAATTTGACCTTTGAAGATGCTGTCAAGTTGCTGGAGAAATGCATGCGTGTGCTTTTGTATCGTGATAG GTCTGCTGTCAACAAGATACAGGTTTTATTCTTTTTCCTTTTTCCTATTTCACCATGTTCCCTCCAATAGCATAGGAATGAAATGTGTACCTAAATCTTA AGAAAGCTGCAATGGTGCATAATCCATATGGATGTTGTATGCTCCCGACTTTGGTCTACATGAAAAAAGTGGCATGCAGAATGAATTGAAGTATCATCAT AAAAAGTGAATTCAAAATTCACAAATAAATTTTGACAAGTTTTGGACTTTTGGGTTACCAATGAAATTTGGGTTGAATAATGATTGGTTTCTGGTTGGAT TTGTTCCATAGGTCTCAGTTTCTTCTGCTGGCACAGGCCAAATAACTTTTAAGGCAATTTAAGTAGTGGGGGCTAGTAAGCTCTAAATCTCATGGTACCT AAATGACTAAGTCTTTAAGTGACCCTTTTTGCTTGGGATTGTACCCTCCTTTCTCTAAATCCTATGATGGCCACTTGGCACAAAAAGGTAAAGAAGTTGA AATTTTTTAGAAGGCAGATACCCTTACTTATCTTATGTGGAATTACTTAGTATGTTTTGCCTGGTATGGTTAGAATTATTTAATCTGGCCAGCTTAGCTC ATCATAGCATAGAATAGAGTCAAGGATTAAAGGTGTTATCTTAGCTAGAACAAGCTTGTAGTGCATATTGACAGGAAAGAGGGGAAAGGGTATATTTGAT ATAATAATATAGCTATTAGTTTGTGGTTTGTTTCCTTTATGTGGATGCACAGGGGAACCAAAGTAAGATCTTAAATTTACTTGTTACAAATAATATCAGT ACTCGTACAGTCTTGCTTATTACCCAGTTATGGGATTATAGAAAAGAAATGCATTGCCAATGAAGTAGCTCAACTGGCACTGGCCCAATTCTTATAGACT AGGATGTGATGTTGATTGTGAGGTTTGATTCGTCATCGGTCCACCTTTTCTAATCCTCCACTTAGTTGCTTTCACCTCCTAACCAGCCAAAATGAAAACG AATCCATATAAATGAGTTATTTACAAAACTATCTGGAAGACGAGAGCACCTAGAACTAGATGATTATTTTTGTCAGTTCCTACTTCCCTGACATTATGAC ACCCAAGGTGCAATACTTTCAAGGAATTGTTCAATATACAAGCATGTTCATATTTTCTCATCAAGGTGCAAATGTATCATTTCTTTGCTTTTGCCTTCTG TTTAGTCTTGTTGGTGATCATTATGACAGCTAACCACACATTGCTTCTTATTTTATATGCCGTGGTGCTAGGAATGTACTAAATTGCAGGGAGGGTTTAT TGCACCCTTTCTATCGCATGTATATCACACCTAGATCTGACTCGTCTTCCTTCGTACATTTTTATATTCTTATAGTTTTGATTGAATTGCCAATTGCATG GATGATTGGGTTATCATACTTAGTGAATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGAAGGTGCTACCTTGTTCCCACCATTCTCATTGA AAACACACTGGGAGTTCTCTGCTTTCAGGAATCCAACAGCAGGTGCTGAAGGTTCATGGTAGGTTGATGGGCATGGAATCAAATGAAACTGAAATGTTGA ATGGATATTAAATCTTTCCAATTCCAAAGGGTACTTTCATGGTGTTAAATGGATATGGAGTGAAATAACTGATGTGGGTTTATGTTTTCAGTAAAGTTTT TATTAATTGACTTGACATCTCTTCCAGAGTAATGGTAGTTCATCTAGTTAGAAGAAAACTACCAGAATTTTAATTTAACATCTTCAGTTTAGTCGCAGCT ATTTGTGTTTAAGCCTGAATGGATGGTAAATGTTGTGTTAGACGGTCCACCCCAACATAAAACTGTCAAATTTTTATGAGGGGATCTATTTACTTCAAGA GTAAGTTAAAAAAACATTCTCCATATATTAGTCGTCTATTCTCCAAATTATACTTATTAATTCAAATAATTGGATTTTTCTAAAACGAACGACAAATATG TGAGAGTATGTTTTTTTGAGACCAAGCATGCCTATTTCTACCCAAAGTCAATATGCACTAGCATACAGGTCTTCTGGTGTGAGGAGTGTCTTTGCCCTTT GGAATGAGGATCTCATGTCATCAAATATGTTCCAAATCATATACCAAACCAATTAGAATAAAGAAAAAATAAATAAAAATATAAATATTTAATTTTTTTG ACTAATGTGACATATTGTTATTAATTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149783
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 84.54% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 84.54% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453990.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |