| Id Trinity | FTRINITY_DN57682_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_149784 |
| Sequence | TTTCAGAATTATAATTTTCCTATATAACATCTATCACCCTCGTTGTCACTTATTGTTTACTAAAAAAACAAAGGAAAAATATACTACCTCGATTTATTAA TTTATTTAATCACGAAAAATTGTTCTCTTGAACGAAGGTAGAAAAAGAAGAGATCCCACAACAAAAAATAAGTGTTTTTTCAGAGGTCACCGTTGTTTGC AATTGTTGAATTTACAAATCGCTTTTCTTGTGTTGCGATGGGTTCTGAAGCTGAAACACAGAGAACTTTGTACCCGTATGTGACAGGATCCTCTGTAGTT GCAATCAAATACAAAGATGGGATTCTCATGGCTGCTGATATGGGAGGTTCTTATGGGTCCACCCTACGCTACAAGAGCATTGAGCGTTTGAAGCCTATTG GGAAGCATTCCCTTCTTGGTGCAAGTGGGGAAATAAGCGATTTTCAGGAGATTCTACGTTACCTTGATGAACTTATCCTTAATGATAACATGTGGGATGA TGGGAATTCTCTAGGGCCTAAGGAGGTGCACAACTATTTGACTAGTGTGATGTATAATAGGCGGAACAAGTTCAACCCTTTGTGGAACTCCCTTGTGCTT GGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACGGTTAACATGATTGGTGTTAATTATGAAGACAATCACATAGCCACTGGGCTGGGAAATCATCTTG CTAGGCCAATTCTCCGTGATGAGTGGCATGAGAATTTGACCTTTGAAGATGGCATCAAGTTACTGGAAAAATGCATGCGCGTGCTTTTATATCGTGATAG GTCTGCTGTCAATAAGATACAGGTTTTGTTCTTTTTCCCTTTTCTTGTTTCACCCATGTTCCCATCAATACAGCAGATGGGTGAAATGTCTAGCTAAATC TTTAGAAAGCTGCAAGGGTGCAAAGTCCATATGGAGGTTGTATTCTCCCTACTTTGGTCTAAATAAAAAAACGTATACAAAAGAATTCAAGGCCTCGTCA TAAAAAAGTTAATAAAAATTTCATAAAATTCTAATATAAGTGAAGCTTCATTGTCTTAAACCTATAGTTTTTTGGTGCATACTTTCGTCAGCACTGCATG CTCATCTCCCTTTCATTTTGCATTGTTAGATCTCTAGTCAAATTCACAATTTATGCATCTTTCAAAATATTTCCATAACTATATTAGTTTTGGACTTTTA GGCTATCAATGAAATTTAGGTTGAAACTTGATTTTTTTCCTTGGTCTCTGTTTGGTTTTATTCAGTAGTTCCTAGTTTCTTCTGCATTACTGTCATTATT TAGAAAACCATACTTATTTATCGGTTAAAGGCTTTAGATTCAAAATTTTACCCATTGAGAACTATATGGCTTTCTTATAAAAAAGAACCACATGGCATTT GGCACAGGCCAAATAATTTGTAAGGCAGTTTAGGTGGTGGGGGCTGTAAGCCTTAACTCACAATCGTACCTAAATGTTTAAGTAACCTTTTTATTTGGTA TTATATCCTCAATTCCTCATGAGGTCTAATCCCCTGATCCTCACTTGGGGCAAAAAGATAAAGAAATTTGGAGGTTTTTAGAAGGCAGATAACTTAATTA TTTTCTGTGTAATTGCTGAGTCTGTTTTGCTTGCAAATGTTGGAATGATTTATAATCTAACATAGCATATAATGAAGTCTTAACCATAGAAAGATTGAAG GCAATATCTTAGAAGCTTGTACTGCATACTGACATGAAAGAAGGGAAAGGGAATATTTGATATAATAATGTGGCTATCAGTTTGTGATTTTTTTCCTTTC AGTACTTACTTATTACCCAGACATGGAATCATTAAAAAAAGAATGTGTTGCCATTTGCCAATGAAGTAGCTCAACTGACACTAGCCCAATTCCCAATCCT CCACTCAGCTGCTTTAACCTCCCAAACAACCAAAATTAAATAGAATCCATATTAATGAGTTATTTAGTATTTACAATAGTAACTGGAAGATTAGAACGTC CAGAAAAATATGGTTTTCTGTCAGTCCCTATTCCCCAGCCAAATCCCTGTCTAAAGGCCTTGTTTCAAGGAGTTGTTCAAATATACCAGTTTGTTGTCTT CTGTTCAGTATTGGTGACCATTATGACAGCCAACTACACATTACTTTTTTTATATGCTGTAGGAATGTTAAGGTACTAAATTGCAGGGAGGGTTTGTTGC ACCCTTTCTGTCATGTGTTTATCACATCTAGATCTGGCTTTTCTTCCCTCATACATTTTTTAGATTCTGGTAGTTTTAGTTTTAATTGAGTTGTGTGAGT GATTCCGTTATCATACTACGTGGATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGAAGGTGCTACTATGTTCCCACCATTCTCATTAAAAA CAAATTGGGAGTTCTCTGCTTTCAGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149784
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 84.54% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 84.54% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453990.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |