| Id Trinity | FTRINITY_DN57682_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_149748 |
| Sequence | CTTGAACAAAGGGCAAAGGAAAAAGAAAAACATAAAAGCAAAAAAACGAAAGTGTTCTTCACTTTTCAGATTAGCACTACACATCGTTTATTACTCCATT CTTCTCTGCACTTCACTGCTCATTTTACAAATCGCTTCAATTGTGTTGAAATGGGCTCTGTAGCTGAAACACAAAGAACTCTGTACCCGTATGTAACGGG ATCATCTGTGGTCGCAATCAAATACAAAGATGGGATTCTCATGGCTGCTGATATGGGAGGTTCCTATGGGTCTACACTACGATACAAGAGCATTGAGCGC TTGAAGCCTATTGGGAAGCATTCCCTTCTCGGTGCAAGTGGGGAAATAAGTGATTTTCAGGAGATTCTACGCTACCTTGACGAACTTATGTAAGCCCTGG TTATTTCTCGCCGGGGAAAGCCAGAAGAACCTTCTTACTTGAATTGTTTGCATTTCATTGTCTCTGGTGATTGGTTATTTTTCTTTCTTTCAAACTTCAA GGAAATTATTCCATTTGCATAGCCCACTTCCCATCCATTTCAGATTTGATTACTTAAATGTTTATGTGTAACTTTTGATTTTGAGTTTTGACTGTTGCAG CCTTTATGACAACATGTGGGATGATGGAAATTCTCTAGGGCCTAAGGAGGTGCACAATTATTTGACTCAAGTGATGTATAACAGGCGGAACAAGTTCAAC CCTTTGTGGAACTCCCTAGTGCTTGGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACAGTTAACATGATTGGGATTAATTATGAAGACAATCATGTAG CCACTGGGCTAGGAAACCATCTTGCTAGGCCAATTCTCCGTGATGAGTGGCATGAGAATTTGACCTTTGAAGATGGCATCAAGTTACTGGAAAAATGCAT GCGCGTGCTTTTATATCGTGATAGGTCTGCTGTCAATAAGATACAGGTTTTGTTCTTTTTCCCTTTTCTTGTTTCACCCATGTTCCCATCAATACAGCAG ATGGGTGAAATGTCTAGCTAAATCTTTAGAAAGCTGCAAGGGTGCAAAGTCCATATGGAGGTTGTATTCTCCCTACTTTGGTCTAAATAAAAAAACGTAT ACAAAAGAATTCAAGGCCTCGTCATAAAAAAGTTAATAAAAATTTCATAAAATTCTAATATAAGTGAAGCTTCATTGTCTTAAACCTATAGTTTTTTGGT GCATACTTTCGTCAGCACTGCATGCTCATCTCCCTTTCATTTTGCATTGTTAGATCTCTAGTCAAATTCACAATTTATGCATCTTTCAAAATATTTCCAT AACTATATTAGTTTTGGACTTTTAGGCTATCAATGAAATTTAGGTTGAAACTTGATTTTTTTCCTTGGTCTCTGTTTGGTTTTATTCAGTAGTTCCTAGT TTCTTCTGCATTACTGTCATTATTTAGAAAACCATACTTATTTATCGGTTAAAGGCTTTAGATTCAAAATTTTACCCATTGAGAACTATATGGCTTTCTT ATAAAAAAGAACCACATGGCATTTGGCACAGGCCAAATAATTTGTAAGGCAGTTTAGGTGGTGGGGGCTGTAAGCCTTAACTCACAATCGTACCTAAATG TTTAAGTAACCTTTTTATTTGGTATTATATCCTCAATTCCTCATGAGGTCTAATCCCCTGATCCTCACTTGGGGCAAAAAGATAAAGAAATTTGGAGGTT TTTAGAAGGCAGATAACTTAATTATTTTCTGTGTAATTGCTGAGTCTGTTTTGCTTGCAAATGTTGGAATGATTTATAATCTAACATAGCATATAATGAA GTCTTAACCATAGAAAGATTGAAGGCAATATCTTAGAAGCTTGTACTGCATACTGACATGAAAGAAGGGAAAGGGAATATTTGATATAATAATGTGGCTA TCAGTTTGTGATTTTTTTCCTTTCAGTACTTACTTATTACCCAGACATGGAATCATTAAAAAAAGAATGTGTTGCCATTTGCCAATGAAGTAGCTCAACT GACACTAGCCCAATTCCCAATCCTCCACTCAGCTGCTTTAACCTCCCAAACAACCAAAATTAAATAGAATCCATATTAATGAGTTATTTAGTATTTACAA TAGTAACTGGAAGATTAGAACGTCCAGAAAAATATGGTTTTCTGTCAGTCCCTATTCCCCAGCCAAATCCCTGTCTAAAGGCCTTGTTTCAAGGAGTTGT TCAAATATACCAGTTTGTTGTCTTCTGTTCAGTATTGGTGACCATTATGACAGCCAACTACACATTACTTTTTTTATATGCTGTAGGAATGTTAAGGTAC TAAATTGCAGGGAGGGTTTGTTGCACCCTTTCTGTCATGTGTTTATCACATCTAGATCTGGCTTTTCTTCCCTCATACATTTTTTAGATTCTGGTAGTTT TAGTTTTAATTGAGTTGTGTGAGTGATTCCGTTATCATACTACGTGGATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGAAGGTGCTACTA TGTTCCCACCATTCTCATTAAAAACAAATTGGGAGTTCTCTGCTTTCAGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149748
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 83.04% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 80.17% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465136.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |