| Id Trinity | FTRINITY_DN57682_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_149754 |
| Sequence | CTACGTTACCTTGATGAACTTATGTAAGCCTTGGTTATTTCTCACTGGGAGCAATTGACTTTGTTTTCAGTGCTTGTTTTACTTATTTAGGCTCAAAATT CACGAAAACGAGTCTATATGTGAATTCCCCCTTCCCAATCATTCTAGACTTGATTACTTCAATGTTTGTGTAACTTTTGATTTTGAACTTTGACTGTTGC AGCCTTAATGATAACATGTGGGATGATGGGAATTCTCTAGGGCCTAAGGAGGTGCACAACTATTTGACTAGTGTGATGTATAATAGGCGGAACAAGTTCA ACCCTTTGTGGAACTCCCTTGTGCTTGGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACGGTTAACATGATTGGTGTTAATTATGAAGACAATCACAT AGCCACTGGGCTGGGAAATCATCTTGCTAGGCCAATTCTCCGTGAGGAGTGGAATGAAAATTTGACCTTTGAAGATGGCGTCAAGTTACTGGAAAAATGC ATGCGTGTGCTTTTATATCGTGATAGGTCTGCTGTCAACAAGATACAGATATCTAAAATAACCGAAGAAGGTGCTACCTTGTTCCCACCATTCTCATTGA AAACACACTGGGAGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149754
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 80.45% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 78.87% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453990.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |