Ll_transcript_148837

Id TrinityFTRINITY_DN57694_c1_g2_i3
Name TranscriptLl_transcript_148837
SequenceAACACTTTGAGATGAACCTAGCCATGATTCAATCCCGGTTAAACCTAAACCTTGTATTCTTCACCATTTTCTTTCTCATTCTTCCTCTTTAGGAAAAACT CACTCTCCATTTCGCATATGCTTTTTTTGTACTTTCACGCTTCCCATTAACACTCTTACACACACCACTCCCCTTCCCCTTTTTCTCCGCCACATTCATT CCCTTCACTTTCTCCTTTATCTACCTCTGCATTTCTCATTCTTCACTCAAATTCTCTCTCTCTCTGTTCTTATTCATGTACTACATTTCTATTAAAAAAA TCTGATTTTTACTCAATACATAACCCAGCATCAACATCTTGTAACTGTTTCTGTTGTTTCTGCACATACCCAGAAGCTTAAAATCCATCAAAATCCAATC TTGTTTGTGAATTCTTACTGAACCATGGATTCTAAGTCGGGTTTAACTCTTGGGTTAAGTTCACACATGACAACCCCATCAACCCCTTCTGTTCACACGG TTCTGTTCAAACACGAATCATCATCATCATCGTCAGCATCATCAACACAAACAGAAGAAAGCAACCTTGAACAATTCCAAGAGGACAATGAAACTATCAA TTTCATGGGTCAAAGTCTTTCTCTGAAGAGGAATAGAGAATCACAATATTCATGTTTCCCTTCAAAACGTGTCCATGTGAGTAACACCATAGAGGCAAAG AGAACTTGGGTTCAACGTTGGGGGAACAAATCAATTGAAAATGCAGACCCAGAAATCTTCCAAATCATGGAGAAAGAGAAAAGAAGACAATTCAAAGGGA TTGAATTGATTGCTTCTGAGAATTTTGTATGCAAAGCAGTGATGGAAGCATTAGGTAGCGCTTTAACAAATAAATACTCTGAGGGAATGCCAGGTGCAAA ATATTATACTGGTAATCACTACATTGATCAAATTGAATTTCTATGTTGTAATCGTGCATTAGAGGCTTTTGATCTTGATTCTCAGAAATGGGGTGTTAAT GTTCAACCTTATTCATGTACTTCTGCTAATTTTGCTGTGTACACTGCACTTTTGCATGCTGGGGGTAGAATTATGGGTTTGGATTCAGCATCTGGTGGAC ATTTGAGTCATGGGTATTATACTATGGGTGGGAAGAAGGTTTCGGCTGCGTCAATTTTCTTCGAGACTTTGCCTTACAAGGTTAATCCTCAAACTGGGTA CATTGATTATGAAAACCTTGAGGATAAAGCACTTGATTTTAGGCCCAAGTTACTTATTTGTGGTGGGAGTTCTTATCCTAGAGAATGGGATTATGCTAGG TTCAGACAGATTGCTGATAAATGTGGAGCAATTTTGATGTGTGATATGGCTCATATTGGCGGTCTCGTGGCTGCGAAGGAAGTAGTTAGTCCCTTTGATT ACTGTGATATTGTTACCTCAACAACCCACAAAAGTCTCCGAGGTCCAAGAGGAGGTATCATCTTTTACAGAAGAGGGCCAAAACCAAGGAAGCAAGGCTT TGTTCTTAGTCACGGAGACAATAATAATTACGATTTTGAGGATAGGATAAACTTTGCTGTATATCCATCATTACAAGGAGGTCCTCACAACAATCACATT GCTGCACTTGCCATAGCTTTGAAACAGGTTGCATCTCCAGATTATAGAGCATACATGCAGCAGGTGAAGAAAAATGCGCAGGTGTTAGCATCTTCCCTGT TGAAAAGAAACTGCAGATTGGTAACTGATGGGACCGACAATCATATGTTGCTCTGGGATCTAACTGCAAGTGGCTTAATAGACAGAAACTATGAGAAAGT TTGTGAGGCGTGTCACATCACTCTCAACAAATGTGCCATTTATGGTTCTATTTCTACTGGTGGAGTAAGAATTGGCACTCCTGCAATGACAACAAGAGGC TGTGTGGAGGAAGATTTTGAGACCATAGCTGATTTTCTTCTGAGAGCAGCTCAGATTACCAGTATTGTACAGAGGGATCACGGGAAATCATCCAAAGACT TTCTCAAGGGTCTTCAGAATAACAAAGATATTTCTGAACTCAGAAACTGGGTCGAAACATTTGCCTCCCAGTTCGCAATGCCAGGATTCGATATTTGATT TGAAATTACAGAGTAGGCAGCATCCATACATCCTTGACATTATTATGTCTCGGCTTACCTTCGATTTCTACCTTTTTGAAGTATTTTGGCATGGTAACCA CAGGTCCCCCCCTTAGATATTTGTCAAGTTGGCTCATATAGATTATGGATTCCAATAGGCTAAGATCACCATGCCCCCTTCATACATCATACTCAGCAAC TCTTATTACTTTGACTTTGTAAAAATTATTCAAGGGTCATTTTGGTGCCTTTTCTCCAACCACAACTTTTGTGGCTGTCTTTGTTTATGAAAAAACTTAT GTAATTACACTTCATTGTTTTAACAGGAAATACACACAAAAAGTGTTACTATTCACTGCTCATATTAACATGTTATAATTGAAATGTGCTGGCACTATTT TATAGTCATTACTGGATAAAAA BLAST
Tissueflowers
Gene nameLI_gene_70819; 
Additional informationdetails; 

Expression of Ll_transcript_148837

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_148837
BlastpSerine hydroxymethyltransferase 6 from Arabidopsis with 65.02% of identity
BlastxSerine hydroxymethyltransferase 6 from Arabidopsis with 69.46% of identity
EggnogCatalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)(COG0112)
KeggLink to kegg annotations (AT1G22020)
CantataDBLink to cantataDB annotations (CNT0002904)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438565.1)
PfamSerine hydroxymethyltransferase (PF00464.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;