Ll_transcript_148842

• Id Trinity: FTRINITY_DN57694_c1_g2_i4
• Name Transcript: Ll_transcript_148842
• Sequence: CACACAACACCCCCCCCCCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCATCTTACTCATGCGTTATATTTCTATTCAAAAATCTCTTTTTTCATCAAAC CCTAACCCTGCATCAACATCTTGTAAGTGTTCTTGTTGTTTCTGCACATACCCAGAAGCTTAAAACCGATCAAAGTCCAAACTTGTTTGTGAATTCGAGT CGATCCATGGATTCTAAATCGGGTTTAACTCTGGGGTTGAGTTCACACATGTCAACCCCATCAACCCCTTCTGTTCACACGGTTCTGTTCAAGCGCGAAT CATCATCAGCATCATCACATTCAGAAGAAAACAACTTTGAACAATTACAAGAGGATAGTGAAACTATCAATTTCATGGGTCAAGGTCTCTCTTTGAAGAG AAGCATAGAGTCACAACAATCATGTTTCCCTTCAAAACGTGTCCATGTTGAAAAGACTATGGAGGCAAAGAGAGATTGGGTTCAAGGTTGGGGGAACCAA CCACTTGCAGTTGCAGACCCAGAAATCTTCAAAATCATGGAGAAAGAGAAAAAAAGACAATTCAAAGGAATTGAGTTAATTGCTTCAGAGAATTTTGTGT GCAAAGCAGTGATGGAAGCACTAGGTAGCCCTTTAACTAATAAGTACTCTGAGGGAATGCCAGGTGCAAAGTACTATACTGGTAATCACTACATTGATCA AATTGAGTTTCTATGTTGTAAACGTGCATTGGAGGCTTTTGATGTTGATTCTCAGAAATGGGGTGTTAATGTTCAACCTTATTCATGTACTTCTGCTAAT TTTGCTGTATACACTGCACTTTTGCATGCCGGGGACAGGATTATGGGTTTGGATTCACCATCTGGTGGACATTTGAGTCATGGGTATTATACTATGGGTG GGAAGAAGGTTTCGGCTGCTTCGATTTTCTTTGAGACTTTGCCTTACAAGGTTAATCCTCAAACTGGGTACATTGATTATGAAAACCTTGAGGATAAAGC ACTTGATTTTAGGCCCAAGATACTTATTTGTGGCGGGAGTTCGTATCCCAGAGAATGGGATTATGTCAGGTTCAGGCAGATTGCTGATAAATGTGGTGCA GTTTTGATGTGTGACATGGCTCATATCAGTGGTCTTGTGGCTGCTAAGGAAGCAGCTAGTCCCTTTGATTACTGTGATATCATTACCTCAACAACCCACA AAAGCCTCAGAGGTCCAAGGGGAGGTATCATCTTTTATAGAAGAGGGCCAAAACCAAGGAAGCAAGGCTTTGTTCTTAATCACGGAGACAATAGTAATTA TGATTTTGAGGAGAAGATTAACTTTGCTGTATATCCATCATTACAAGGAGGTCCTCACAACAATCACATTGCTGCTCTTGCCATAGCTTTAAAGGAAGTT GCAACTCCAGGTTACAAAGCATACATGCAGCAAGTGAAGAAAAATGCACAGGCATTAGCATCTGCCCTGTTGAAAAGAAAATGCCGATTGGTGACTGATG GGACTGACAATCATCTGTTGCTCTGGGATCTAACTGCACTTGGCTTACTAGACAGAAACTATGAGAAGGTCTGTGAGGCGTGTCACATCACTCTCAACAA ATGTGCCATCTATGGTTCTATTTCTACTGGGGGAGTTAGAATCGGCACTCCCGCAATGACATCAAGGGGCTGTATAGAGGAAGATTTTGAGACCATAGCT GATTTTCTTCTGAGGGCAGCTCAGATTACCAGCATTGTACAAAGGGAACATGGGAAATCATGCAAAGACTTTCTCAAGGGTCTTCAGAATAACAAAGATC TTTCTGAACTCAGAAATAGGGTTGAAACATTTGCTTCCCAGTTTGCAATGCCGGGGTTCGATAATTGATTTGCAACTGCAAAGGAAGCACAGCCATACAT CCTTGACATCAATATATCTTGGCTCAAGTTCCACCTCCACCTTTTGTTGAGTTATTTTTGCATGGTAACTTGTCGGTTTTTTGGCCCCTTATCCAGTTAA CTCATGTAGATTATAGATGCAAATAGAACTCAGATCAAAATGCCACGTTCATACTTATTACATTTGAGACATTGTACAAATTATTCAAGGGTGATACTTA TACCGGTCTCTTCAACCACAATTTGTGGCTATATTTGTTTATGGAGAACTTCAGTAATTAAGTTACACTTTACTGCAGAAATACATAAAAGAAAAGTGTT ACTATTATTCACTGCTAGTCTTAACATATTATTTATAATGTGCATGACATTATTCTATAGTCATCACTAGATATGTATTTCTGTTTGTTCATGTTTATAG AGCTTAATGCATGGGATTTTAAATAGGCTTGTATAATGTAGCAATTGGAATTAAATTTTGAGAATACAACAAATATTTTGCCAGTGTAATATTTGTATAC TGTTAGAATGAAAATTTATATACATGCAGTACATTAAAA
• Tissue: flowers
• Gene name: LI_gene_70819;
• Additional information: details;

Expression of Ll_transcript_148842

FPKM

• FPAB: 32.7
• FPNAB: 7.2
• LF1: 6.5
• LF2: 9.1
• LF3: 9.1
• LF4: 6.7
• UF1: 5
• UF2: 7.4
• UF3: 8.8
• UF4: 7.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_148842

• Blastp: Serine hydroxymethyltransferase 7 from Arabidopsis with 72.99% of identity
• Blastx: Serine hydroxymethyltransferase 7 from Arabidopsis with 72.99% of identity
• Eggnog: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)(COG0112)
• Kegg: Link to kegg annotations (AT1G36370)
• CantataDB: Link to cantataDB annotations (CNT0002904)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417396.1)
• Pfam: Serine hydroxymethyltransferase (PF00464.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;