| Id Trinity | FTRINITY_DN57727_c5_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_214966 |
| Sequence | AGCAGCTACATTTTTTCACATTCCCGATTTAGGATTTCACCTACTCATTGAGTTTGGATGAATTTAATGACCAAAATGGAAAGAACACTATTTTGAATTC AAAATTATCAAACGGTGACTACCAAAACTTTTTGACGCCATAGTTGTAACATTTTTCCCTCTCAATTTCCCATTTGATATATTCTCTTACACTTCCCTCA CCCTTCTTCCTTCAATTCAATTCAATTCATCGCCATGATCCATTCTTTTCCCAATTCCGAATCCGATTCCACTTTTTCCCCAAACAAGAGACAGAGAAGG ATCACTTCTGCTATCATCGATCTTAAACCCTTAGATTTGCCTCTCTTTTCGTCATCCACAACCAACGACGTCGTTTCAACTCACCACTCTATCATCCTCA ACTCCGACCACCCCTACACGATCGGACGCTCACCCCGCCACTGCGATTTCGTGTTCTCCGATCGCCACGTCAGCAAGCGGCACTGTCAGCTTCTCCTCGA CGCTTCCCTTAACAAACTCTACATCCTAAACGGTGTTTTGTTACCCCAAAACGGCTCTGCTGAATGCGTCGTTTATGAGTTCAGGAAAAGGGTCATGTTG CCGTTTCATCGTGGCAGTTATGGTCATGGTGTTGCGTTTCGAGAATCTTCCAATGGGGTTTTTGTGAACGGCGTTGAAGTAAGAAAGGGAATGGCTTCAG AGGTGTCAATTGGTGATAAGGTTTCGCTGGTTTGTGGAAATGAAGATGGTTCGTGTTGTGTTCAGGATCGGAAAATTGGGTTTGTTGTTCAAAGAATTGA TTTTGATTTTAAATTGAATGATTTAACATTACCGGGGCATTCCCAAGGGAAACGGAACAAAAGGGTTTTTGCTGTATCTAGATATGAGAGAATTGTTGGG AGGACAAATTTTCTTTTGGATAGGTGCCGTGAGATTTTGCTTAGTGATGATCCCATATCTCGTGTTATGCGTGCTGTTTCGGAAATAGAAACTGGTAGAT TGCGTGTAGACGGTGAAGTGCAGTCTAAGTTACTTAAGAACTCTTCAAATAAAGATAAACATGATGGTGTAGTTCAGTGTAGTTCGGCCATACTTTGTCA AAATAAAGTGATGGTTTTGGAGCGCGAATGTGACCTTCATCGCGATTTTTGCGGAGAAGTGAATGTGGGAAATGTTTGTGGTAATGATGTTGAAAGTAAT GGTATGGTTCAGTCTTGTTCAACTTTGTTTTGTGAAAATAAAGATATGGCCTTGGAGGCAAAATGTGACAATGGCGTTTTTTGTGGAGAAGGAAATGGTG TTCTTGATGAGAATCCGGATTTGGTGCTGTTAGATTCTGTAGGGGAGGATGATCTTCCTTTTGGTAGGAACAAGCAGGAAAAACAGTGCGGAGGTGGTTT TTACCCATCTCCTGGGAAGAGTTTTTATCTGAATCGCCTTGAATTTATGGACCATGGCTCCTCGGGTCTTCATCCTTCCATATCTCTCCCTGAACTTCTT TATCCTGTTGAAAGCATTTCAAGGGTGTTTATTGCATCGTTTACAACTGACATAAAATGGTTTTTGACATATTGCAAGATTCCTTTTCATCTGCCAGTTA CAATAGCTTGTCATAACACTCAGAGATGTTGGAGTTCAAGACTTGATGATAGGGTATTTGTTCCTTGCAAGGATTATCCTAACCTTGTTGTAGTGTATCC TCCATTTCCCGAATCTATAGCATTTACTAATAACAGCAAGAGGCATGGGATTGCTTGCCATCATCCAAAGTTGATTGTCGTGCAAAGAGGAGATAGTATT CGAGTTGTCATTACATCTGCAAATTTGGTGGAAAAACAGTGGAACAGTGTTACTAATACTGTATGGTGGCAAGATTTCCCTAATGCCACGTTAGCTGACT TTGCATCACTTTTCCCAAAAACTGATGGTGATATTCGTAAAGATCCAAAATGTGATTTTGCTTCTCAGTTGGCTGGGTTTATGGCATCTCTCATTATTGA TGTACCCAGCCAGGCCCAATGGATCTCTCAGTTGGCAAAATATGACTTTGGAGGTGCAGCAGGACATCTTGTTGCTTCAGTACCTGGAGTTCACTTTAAT GCAACTGTTATGCCAGAGTCTGTAAAAGCATTGCCTCAGACTCAAACAGTGAAAGACTAAAAGCACTGGCTGCTGTGCTTGGAAAGTTTAGTACGAACTC TTATGGGAGGCTGGAGATTACGCTACAAAGAAATTTCCACGTGCCTGCTGATGAAAATGCTGTTAGCATTCTTGTTCACAACCCTGATGGAACTTCAGAG GGAGATTATGTTCAACTTGGTTTTCTGCCTAGAAATGTGGCAAAATGGGTTTCTCCTCTTTGGGATGCTGGATTCTTCATGTTTTCTGGATATATTTGTC CAAAAGAAGCCCTTGCAGCTGCCTTAGGAGAAAACTGCACGAAAGTACTACTTATACTAAATGTGTCGAAGGGGCAACGATTTCGAGATATATCAAAGAT GATGCAATCTGAACACATTGTTGCATTTTCCTCACTCATTGCTTCAATCCGAAGATGTTATGGCCTCTGGAGATTGCAAGAGGTTCTAAATCAGTACAGA TGGCCTGAATCATTATCATCTGACATTATATATGGTGCATCTTCTATTGGTTCTATTAATTCAAAATTTCTTGCTGCATTTTCGGCTGCTGCTGGGAAGA AATCAATGCAACATTTTGATTCAGAGGAGTCTGATCCTGAATGGGGCTGCTGGAATGCTAGGGAAGAATTGAAGAATCCATCCGTAAGGATCATTTTCCC CACTATTGAAAGAGTGAAGAGCGCATATAATGGAATTTTACCTTCTAGACGTGTTCTTTGCTTCTCAGAGAGGACTTGGCAAAGGTTGAAAACTTTAGAT ATACTTCATGATGCCATCCCTCATCCTCCGGATAGAATAGGGCATCCAATGCATACCAAGGTGTTACAGAGACGCTTCTGGTCTAGGACGGATGAACATT CCTTTGGTTGGGTATACTGTGGGTCTCATAATTTTAGTGCAGCTGCCTGGGGGCGACAAATTTCAAATCCACTTGGTACCAAAGCTGATGGACCTCATAA AATCGACCCTTCTATGAATTCTGGGCTTCACATTTGCAATTATGAACTTGGGATTATTTTTACTTTTCCTCCTACAGAAAACGATTGTTCTAAAGTTAAA AGCACAAAATTAGATGATATAATTCTGCCATTTGTTGTGCCTGCTCCTAAATATGGATCTAGAGATAGGCCAGCTACAATGCAGGCTATGAGGGAAGTGA TAGCTGAGCTTGCTGAGCGTGAGGTGGAGAAACTTGCAGAAGAAGAATTGATGGAAGAGCTTCTTGAGGAAGAGGAAGAAATGGAATCAACCAATTATGT TGGAGAGGATAAAGAAGATGAAGAAATAGATGCAACCAATTATGTTGGAGAGGAGAAGGAAGATGAGAAGGCATATGCTGAGATTCTTTGGAGTCAGGTT GATTCTTCCCAGAGCAGCTGAACTGTTACAAAAAGCAATACTTGGAGCAGGAAACAGTAATGATGGAGCTGTAAACAGGAGTCTCTGAAACACCATTGTT AACATCAAATGAAGATTACGAAAGGCATGGTTACTGTAGTGATGCAGTGGGTGGCTTTCAAACTCGCATAAATGATGGCAATTATCCACCTTGGGAGGAA GTGAATGCTTGTCCTGAGATATTGGGATTCAGGAGCATAGCTGTTGGCCTCATGTCTAAAGAAAGTGATTTCCTAGAACACAGGATTCAGGAGCATAGCT GTTAAGTAGGAGATAATTTATTGGAAGTAGGAGATAATTTATCTTCTCTTACCAATAAAAATATTGGAAGTACCTGATAAGTAGGAGATAATTTATCTTC TCCTGAATCCCAATATTGGAAGTACCTGATAAGTAGGAGATAAATTATGATATGTGTACTATTTTGTTTAATTTTAAAAGTATTTTTATATAAAATAATT AAATATGGCACATGTCATAATTTTAGTAGCTAGAGAAAATACTTATATAAGAAAATACAGTATTCTCATATTAATATTCCAAATAAATACTTGAAAGAGA TGGTAGTAATATTTGTGCCTTCAAAATCTCAAACTGACACAATTTAGACTTATTTCTAAATCACAGCCTTTCATCTCACATTCTCATGCATGGTCTTTAG TCATCTAAAAGACCATTATCTTAAAAGAAGTAACAGGATGGAAAGTGGTATGGTCCATTTGCCCTTTACAACAGAAAGTTGATATGTCAAAGCTAAAAGG AAGGACTGCTTTTTGAGGTCACAGATTCTTTGTCCTAACTGGCTTTTAACCTTGTACCAGAAAATCCTTAACTACACTTACTTCTCTTTTCTATCTTTTT ATTCTCCCCTTTCCTTTTCTTTCTTAACTTATTTTCTTCCTCCCCCTTTGGATATTGAGGTGCAAAAAAGCAGCAGCATTTGCTTGAGTTCCATCAAGCC ACCTTAGTGCTCTCTAAGTTATGAGAATGGAGAAGCCACCAATCCATGGTGCAACATCTGATTGTAAACCAATAACAACATTTGTTCACACAAATTCAAG TGCATTCATGGAAGTAGTACAAAGATTAACAGGTCCATCAGAAACTACAGCAACAAAAGAAGGAGATGCAGCAACAACAACAAAGGCTCCTACTCCTACT GTGAAGAGAACAATAACCAAACTACATGAGAGAAGAAAATGCATGAAGCCAAAACTTGAGATAGTAAAACCCACTTTTCAATATAAATCAGGATCAAGTC CAGGAGGATCAAGAAACTCTAGCTTTCCTCCAAGCCCAGGATCAGGGAGTTCAAGTCTTCTTCAAAGTCCAACTACTCCTTCAACTATTTTCTCAAGATT AACTCTTCTGGTGGAAGAAGATGAAAAGAAAGAAGATTCAGCAATACCTGAAATAAACACTGAAGAAGAAGAGGAAGCTATTAGAGAGAGGAGATTTTAT TTGCATCCATCACCAAGGACTAAACAAGGATTCTCTCAACCACAATTGCTAACTTTGTTTCCCATGGCATCTCCAAATACATTTGATAAAGTTTCATTTT GAAGATCATAAGCTGCCACACTATTATCTTTAGCTATACATGTACTCTGACTTATTGAATGACATTTGCAACTTATTCCTTCTTATAATCATTTCCTTAA TTTAGTAATAACTACCCAAGTTATTCATGTATCTGTATAAGGTGTTATTTTTTTGGCTCATATTTAAAAATATATATATTACATGTTCATTCATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71125; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214966
| Blastp | Tyrosyl-DNA phosphodiesterase 1 from Arabidopsis with 25.37% of identity |
|---|---|
| Blastx | VQ motif-containing protein 31 from Arabidopsis with 47.73% of identity |
| Eggnog | tyrosylDNA phosphodiesterase(ENOG410XQPZ) |
| Kegg | Link to kegg annotations (AT5G15170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464339.1) |
| Pfam | FHA domain (PF00498.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |