| Id Trinity | FTRINITY_DN57728_c5_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_213541 |
| Sequence | GCCAAAGCCAAAGCCAAAGAAATAAGAAAAGGCAAAAGAAGAAACACTAAGGAAGATACATAGTTTAGAGAGTGAATGAAAGTGTTATTATGTTATAGCT TTAATCTCACATAAAAACCCAAAAATTCACATCACTATCTATTTCATTATTATTTCCCAAACATCACCATCTATCTTTATTTTACCCCATTTCTCAAATT TTCCAGGTTCTTCTTTCTATATTTCTCTGAACTACTTTTTTCATAAAAATTCAATCTTTATCTATTCTCCTTCTTACCCATTTGTTTAATTCACTTCTGA TTGTCGTTTAATTTGATAATTTAAATTGGGTCTCTACCTTTTCCTCAATTAGCATGTGTTTATGGGTTGATCGTTTCTTCTTTCATGGAAAATTCAATTA TCTGTATGTTTTTTTTTCTATTTTATTTATAAAAAATTAATGTTCTGGATGAGAATTGTGATCACTATTTCTCAACTTGAAGGAAAAATATGATCTTTGT GTTGGTTGATGCATCTGCATAGCTTTAATGTGAAGAAAAGTATCTAATTTTTTCCACTGTAGAAATGAATTTGTCACTGTGTAGCAAAAGACTAAGAACC AAAAAGGCTTTGGCCCTTTAATTAAAAGAGTCCAAATTTGTCTTGTTATTTTAAAATTTTGTACTAGTTATTTGATGTTGTTGAAACACTTATGATTTGT GTTGATTTTATATTGTGGTCCTGATTTGCCATTCTGTAATGCATGCATGTTTCCTTTGGAGCTTGAGCCTTGAAAATTTGCTGCACTGATGAATGCTGGG CAAAGGAAACGGTCTGCTAATCCATAATTCGGGGCATCTGAACTGAAGAGAGAGGTTGGTTTGTGGATGCTTTGCGACTTGTGCAAGATTATGGTTCTGT TGAAGGCTCCTTTTCTCTAAGAATGCATGCTAGATGATTTTATTTAAGCAGTTGAAGAGTGGGAAAAAATTCAAGCTAAATAAAGTGATTGGGAAGCTGG AACAATGGGTTCTGTTTGTTGTTGTTTCAGTTTTGACGATTTTGAAGATTACGTAAACCCAAATAGTTCCGTGTATAGGAACTGTGTGTGTCTCAGTTGC TTTATACAGAACCTCTTGACCGTGTATGCAGCAATATTCCGTAGAGGGGAAGTGCATTCAGTTCCTTCATCTCTTCAAGGGGCAGCATCCTTGTCTTCTA CAGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCCTTACCTTATGATGCAGAACCGAGATATTTTCGCTCAAGGCGTGAGAA GGGTTCAAGTCATTTGAATGAGGAATCCGAACCTCTGAGAAGTGATGTAGATATCGATCCAGAATCATTAAGTTCAGGAGACAAATGGAATGAATGCGCC GGAGAGGATGGATCAAAGGAATATCGTTCTAAGTCCTCACTGAAACTTTCATCAGCAAAATATTCAACTGGAGTCGGGGTTGTCTATGCATCATCAGAAG AGGAGGATGTTTGTCCAACTTGTCTTGAAGAATACACCAAAGAGAATCCAAAGATAATGACTAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGA GTGGATGGAGAGGAGTGACAACTGTCCAGTTTGTGGAAAGGTGATGGTATTTGAAGAAACACTTCCTCTTGATTAAAAGCTTTGTTTGGTGGATTAATGC AGCAACAGAAGAAAGTGAGAATGAATATAAAGTATAAACACTGTGAATACAGCACAGATTAAGTGCTTATTATGTATAGTTAAGTATGAAAAAAAAGTTT TCTTAACCCTTGTTGTGAGTTTAATCTCATCCAAGTTGTTTTCATATTGAATATCCCACATGGCCAATATTGTGAAGGAAAAGAAAGAAAATGGAATTTT AGATGGAAACCTTGGCATGGCTTAAACAGTTTCACCTATTATTGTTTCTGTCATATAAACATGTTCGTTCAAAGTGGAACTGAACTGATAATGAAGTAGG AAACACTATTAATTCAATATAGCAAACACATGTGGAATCAGTGTTATAAAAATTGTACCGTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71142; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_213541
| Blastp | E3 ubiquitin-protein ligase At3g02290 from Arabidopsis with 59.57% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase At3g02290 from Arabidopsis with 57.83% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT3G02290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428703.1) |
| Pfam | RING-H2 zinc finger domain (PF12678.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |