Id Trinity | FTRINITY_DN57729_c5_g4_i1 |
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Name Transcript | Ll_transcript_216188 |
Sequence | ATTTTTGTGGCCTAGGACCCTCTATGCTAAAACAAGATCCTCACATGGTCGAGTGCCATATATTACACACATACACTTATCCTCATGCCTGCAATTGCAT TGGCTTACAAATATCATCCACTCAATCTTAACAAAAAAATCTCCACTTTCTTTTCACACTTCACTGCCATACATACATTACATATCATCACTTCACTTAA CATAACTTAACATAAACATGTCTTCTGTGGTGACTGCTGCAGTTTCCTTTTCACCCTCCTCCACTCTTCCAACAAGAACCTCTCTTTCTGCCTTAGAGAG GGTACCCTTCCAAAGGGTTTCATTCCAATACAGAGATGTTTCTATCAGTGGAAGAGGAGTTTCAATCAGAGCTCAAGTCACAACAGACACAGAGGCAGCA CCTATTACTAAAGTCGTAAAGGAGTCGAAGAAACAGGATGAAGGTGTAGTTGTGAACAGGTTCAAACCCAAGGATCCTTACACTGGAAGATGCCTTCTCA ACACGAAAATCACCGGGGATGATGCACCTGGAGAAACCTGGCACATGGTCTTCACTACCGAAGGAGAGGTGCCTTACAGAGAAGGACAGTCAATTGGGGT AGTTCCAGATGGAGTTGACAAGAATGGCAAGCCTCACAAGCTGAGACTGTATTCAATTGCTAGCAGTGCTATTGGTGATTTCGGCGACTCCAAAACAGTT TCGCTATGCGTGAAACGTCTCGTGTACACAAATGAAAATGGAGAAGTTGTCAAGGGAGTCTGCTCAAATTTCTTGTGTGACTTGAAGCCAGGAAATGAAG TAAAGATTACTGGACCTGTTGGTAAGGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGGTACATTAACTATCAGACTTCATTGTAAATTG AAAAATGTATTTTCAGCTTTTATTTCCATCATTAATCATTGTAATTTTATCCGTAGTTGGCAACCGGAACTGGAATTGCACCATTTCGCTCATTTTTGTG GAAAATTTTCTTTGAGAAGCATGACGACTACAAGGTAAGTGCACACAAAACCTTATATCCGTCTCGAGCCTAGTATCTGGCCTTCAATTTGTTGCAGCTA CATTCTAACATGCAGATATTTTGTCTTTATGGATCCTTAAATTTATACCTGGTAAACATGCAAAATAAATTGATTACTGCCTAAGAAACTGCAGAAGTTT AAATATTGTCATAGATGTATTTGTAGTACCTAGAAGTAGATCCAGGGTGCCATAGGCATTGGTGCTTCTCACTTGGACGAACATTTATACTCGCATACAC GTAATATTTTTATAAAAAATATTTGGCCCTTCCCTCGGCCAATGGTAAGGTTGTTGCCTTGTAACCTCCCGAGGTTCAAAGCCTAGAAATAGTTTCTCCG TTGACTCCACGGAGTGATATCTTTGACTCGTGCTCTAGGTCGCTTCCCTTGGATGTTTTCTGGATTCACCCTTGCTTGTAAGCGAACATTATACGTATTT AACGAGTAACTTAGTTTTGACATGTATATGTATGCAGTTCAATGGTTTGGCATGGCTCTTTTTGGGTGTCCCTACAAGCAGCTCACTGCTTTATAAGGAG GAATTCGAAAAGATGAAGGAGAAATCACCAGAAAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAAACAAACGAGAAAGGAGAGAAGATGTACATTC AAACCAGAATGGCTGAATATGCAGAAGAGCTATGGGAATTACTGAAGAAAGATAACACATTTGTCTATATGTGTGGACTCAAAGGGATGGAAAAGGGTAT TGATGAAATAATGGTGCCTTTGGCTGCTAAAGAAGGTATTGATTGGATTGAGTACAAGAGGCAATTGAAGAAGGCAGAGCAATGGAATGTGGAAGTTTAT TAAGTTCTGTTTATTTGCACAAATCTCAACTCCTACCTTTTGGAGCACCAAATCTATCCCCTCTACTGCATTGTATAGATAGATTACGTCACTGTTTATC TTTCTTTGATGGTTTTTACTTTTTTATCAACAACTTTCATTGTGACAGTCTTGCAAGAAATAATTTTAAGGATAATGCATTATAGATTAAGCCAACTTCA CTTTACCATTTCCTAAATTTATCTATGGTGAAGGGTTTTTGTTTTAAATCAATCACAAATAATGATGATGACATAATCATGTAAATTTTTATATAGTATC TCAATAAACTTTTGTTGTTATATGCATTTTCATATTGGACTTTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_71154; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_216188
Blastp | Ferredoxin--NADP reductase, chloroplastic from Vicia with 80.91% of identity |
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Blastx | Ferredoxin--NADP reductase, chloroplastic from Vicia with 79.55% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000152) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424081.1) |
Pfam | Oxidoreductase FAD-binding domain (PF00970.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |