Ll_transcript_215996

• Id Trinity: FTRINITY_DN57730_c1_g2_i13
• Name Transcript: Ll_transcript_215996
• Sequence: GTGAAAATCTATTGCAACTTATTAGGGAAGTGATTATTCACTTTTCTTCGGGAAAAGATTGATTTTATTTAGAACAGTTTGTGGTTTTATTGTCTGTTTA TAGTTTGTACTTTGTAGTTTTTACCTTGAGGCTTGAACAAGAGTTTATTGTCATTGTTTTTTATTCTTGTTTGAATTTTTAGTGCCTTAAATGTTATGCT GCACTTATTTGACTCAATAGTGATATTGAATATAGCAATTAGCAAAAGCTAGGCCTGGCAGGATATTTAGTCATAGACAGTGATTATATGATCTCATTTC ATTTAGGAGCTTAGTTGAATTTGTGGGCTCTTTAATGTTTTGTTTGGGTTCCAAATCAATTACCTGGCACTGCTACATAATTTGGGACAATAAGCAGTGC GAGTGTTGAGACAATGTTTTGGTTGCATTTTTGTGGCATCTTCTACTGAAACAACTGAACAACTTCTAGAAAATTGGAGGAGGAACTAGCATTGCCAGAT TACGAGAAAACGCACAGTTTTAGACTTTAGTATGGTGTTGTTCATGTAATTTTTTTTTGTGAAGAGAAGGGGAAAGGAGCATGCATCTGGAAATCTCACA ACCTTGCAAAGAAAAATATTATGACTTGCGAAATTTATAGTTGATTCTTATCTTTGGGACTGCAGTGCTTGTATCAGTTAGAACATAGTTGTACATACAG ATGCAAGGACCATAGGTGGACATAAAAGGAAGACTTAACAGCTAGCACTTTATAACCCGTTCAATAATACTGTAATAAACGGATGAATTTTTCAGCAGTT GATAAAGCATGCACTGATAAACGGTATTAACATTTGTTAAAGCATGCACTGATAAGCATGTGATGTGAAATACCATTAAACTACTACATAAAACATTTGT TAGGCAGCCCTTAGTACTAATGCCAATGAAGTGGTTAATTATATTAAAAGAAGATGAAAAGGGGTTTCTTCTCCTTAGGAAGTCACATCACTATCATGCA GCCATCCTTGTCTCATAGTCTTCTTTACCTAGTTCTTTATGTTTCCGGTTGAGTTTTTAATAGAATTGAGAAGATTATGGGTGACTTCCTTTGATTAGGG GATGGGGTTACTGAGAGGGATCATTTGTCAATGGAATGTTTATTTTGCATGCTACAGGGAATTGGGCTGGGCCTCAAAAACTTGGCTGATAAGATCTCCT TATCTGGCAAATGGCCGTGGCATTTTCCAGGAGAATCAAATTCACTTTGGCATCAAGTTATGTAGAGCAAGTACAGATTCGCCAAAATTGATGGGATGTC TCACGTCAATTCAAGAACATGGGATGTCTCACATCAGTTCAAGAATTAGGCCTAGTTGCCTTTTTTACTTTCATGTTCTTGTTTCTATGTTGATAATTTC ATATCCTAGTTCCTAGACTAATTTAGTCTTCTTTGATTTCATGATGTTATGCTCCATAAAAATAGCACTCCGTTCTTCTGTTACGGTTTCAACTATCACC AAAAAGCACTGGAAGCTGCGATGAATGATATAAACAACTCATTTGGAAAGGGAAGTGTTACAAGATTAGGCAGTGCTGGTGGAGCTTTGGTTGAAACTTT TCCTAGTGGCTGTTTGACACTAGACTGTGCTTTAGGTGGTGGTCTTCCAAAAGGAAGAATTATAGAGATATTCGGACCAGAGAGCAGTGGTAAAACAACC CTTGCACTCCATGCTATTGCCGAAGTGCAGAAGTTGGGTGGCAATGCTGTGCTTGTTGATGCAGAGCACGCTTTTGATCCAGCATATTCTAAAGCATTAG GAGTGGATGTAGAAAATTTGATTGTTTGCCAACCTGATCATGGAGAGATGGGTCTTGAGATCGCAGATCGCATGTGCAGATCTGGGGCTGTAGATCTCAT CTGTGTGGATTCTGTCTCAGCTCTCACACCACGAGCAGAAATTGAAGGTGAGATTGGAATGCAGCAAATGGGATTGCAGGCTCGTCTTATGAGCCAAGCA TTGCGTAAGATGTCTGGAAATGCTTCTAAAGCTGGCTGTACTCTTATATTTTTGAATCAAATAAGATATAAGATTGGTGTTTTTTATGGAAATCCAGAAG TGACAAGTGGTGGAATTGCATTGAAGTTTTTCGCGTCACTTCGACTAGAAGTTCGTTCTATAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGG CCTTAAAGTTCGTGTAAGAGTGCAAAAGAGCAAGGTATCAAGGCCATACAAAATAGCTGAATTCGAGATTATATTTGGGGAGGGCGTCAGTAAACTGGGT TGCATTTTAGATTGTGCAGAAATGATGGATGTTGTCTTAAAGAAAGGCTCTTGGTATAGCTATGGGGACCATCGGTTGGGGCAGGGAAGAGAAAAAGCAA TACAGTATCTGAAGGAGAACACGCATCTTTTAGAAGAAATTGAAAAGGTAGTTCGATCATCCTTGTTAGATGGAACCAACCAAACAAGCCATGCATACAC GAAGAATAGTCCAGTACTCTATCAAGATGATGATATTTTTAAGGAAAGTCAATGATAACCAAGCAAATTCTTGTCATGTCTGACTAGCTTGGGAGAAACA CTGTGAGCAGATAAAGCTGGAAAAATGCTTTCTTCACGACAAATGAAGATGGGGTTGGCTTTGATCATTAGACCATTTTTTTTGGTTCATCCTGTTCCAT TGGTAAATGTTAATGAGAAGCATGAAAAATACAGAAAAGGGTTCAATGTGTGTCAATCAAGGCATCTTGATTTCTATATTTGGTTCCTATTTACTGCCAT AATTGTTTCTTATTGCATGCATTTTCTGTTAGTTTTTCCCCTTCTTTTGATCTTGTTAGTTGGGTGAGCCTACAATTGTTGAAGCTAGACCCAACACAGC TACAAAAACTGTCGTTCAGATACTCCCAGAGTTCCAGTAATCGGTTGGATAATTAAATTGCATCAAATACGCATAATCAAATTCAAAATTTT
• Tissue: flowers
• Gene name: LI_gene_71165;
• Additional information: details;

Expression of Ll_transcript_215996

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0.1
• LF3: 0.2
• LF4: 0
• UF1: 0
• UF2: 0.2
• UF3: 0.2
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_215996

• Blastp: DNA repair protein recA homolog 1, chloroplastic from Arabidopsis with 87.54% of identity
• Blastx: DNA repair protein recA homolog 1, chloroplastic from Arabidopsis with 87.54% of identity
• Eggnog: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity)(COG0468)
• Kegg: Link to kegg annotations (AT1G79050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446739.1)
• Pfam: recA bacterial DNA recombination protein (PF00154.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;