| Id Trinity | FTRINITY_DN57739_c2_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_215049 |
| Sequence | CGAGATCTTACACTGATACGTGAGTAACCACTACCACTTTAGTTGCATCTGAAGTATGATATGGAGTACTTAAACAATTTTGGGAACCTTGTTGCTATGA ATTAAACTCAAAGGTCAAAGAGGAAGTGAAGTATAGTTCAAGTTTCACTCAAAAATGAATCCAATGTCTTGGGCTACCACAGATGATGTATTACTCTCTA CCTCTCTAGCCACATACCTTGACAAAAAACTTATTGTCCTGTTGCGAGATGGTCGAAAACTTCTGGGGTTATTGCGCTCTTTTGATCAATTTGCTAACGT AGTTCTTGAAGGTGCATGTGAACGAGTAATTGTCGGTGATCTTTACTGTGATGTACCTTTAGGCCTATATGTAATTCGTGGGGAAAATGTTGTCTTAATC GGAGAGCTAGAATCGGATAAGGAGGAGCTTCCACCACATATGGCTTGTGTGTCAGAGGCCGAGATAAGAAAGGTAAGCACCTCTTGCTGCATCTTATACT ATTGCTAACTGATAACCGTAGGAAGCTTTTTTACGTCATAATAATTTTAAGGGCCGATGGATCAATTAATTCCTGTATGCAAATGTGTATTTGGCATATA AGTACCTCTTGGTTCATCTATATTATTGTTTAGTGATGGCGCATATGAAGCTTTTTCAATCTTGCGGGATGTGGTGAGGCGGACATGACTAGTTGACAAA AGTAATGTAATTACTGCAGTTTTGGCTCGTTTTCAATGTTCAGTGTACAAATTGGAACCGATTCCGGCATTCAAATAAATGGTACTTACATTATAAAGGT CTTGAGCATTGAGAACCAAAGAGTATTGAGAACTTCGTAAATATTACCATTTCTTGAGGTCGGAACCAATTTGATTTTCTGTTAACAATATCATATATAC AACAACAATGTGAGCTTCCATATATGATTGAGAATTTTTACTCCAACAATTTCATATTTTTGTGGAAACATCAGTCAGATTTCGGTTTTTTTGTCTGAGT TTTGATGGCATGTAACTTGCATGCGAGAAAGGACCCTTTTGCTCCAACTCAAACAATATTATGATAATTCATTGTTCTTCTATCTCACATTACTTAAATT CATAGTTCTTCGCTTCATGCTTCAGGCTCAAAAGGCGGACCGAGAATCCAGTGATCTAAAGGGCACTATGAGGAAAAGGATGGAGTTCCTTGATTTCGAT TAAAACATGATGCCATCTTCATAATCAAACTAGCCCAATCTGCAAATATTAATGCAGCTCTGAGTAATGATTGGATAGAAGGTGGAAGAGTAAGTATGAA AGATTCACATTTTCCTCCATGGTACTAGAAAGAAGATTGAAAATTGAGTACTTGACTTGACAGTTAAGAAAAGAAATGAACTTTTTGGCTTTTTTAGAGT GCAAGTGATAGAGTTATGATGCCCTTATGTTTGTAATGAGTTATGATGCATGTTGGTGCATGTTGGTGCATGTTATGAACTCTTAAACTCTACTTTGGTT TTAGAAAATGTGATATAGTGAAGATAATTTATTTGGCTGTTTATTCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71236; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_215049
| Blastp | Sm-like protein LSM1B from Arabidopsis with 76.19% of identity |
|---|---|
| Blastx | Sm-like protein LSM1B from Arabidopsis with 76.19% of identity |
| Eggnog | LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)(ENOG411224Q) |
| Kegg | Link to kegg annotations (AT3G14080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415981.1) |
| Pfam | LSM domain (PF01423.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |