| Id Trinity | FTRINITY_DN57740_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_214839 |
| Sequence | ACAAAATCTCTCTCTAAAAAAACTCGATCCTTATTTTCTGAATCTTCAAAATGGTGCTCGAGGCTACAATGATCTGTATTGATAATTCCGAATGGATGCG TAACGGAGATTACTCTCCTTCTCGATTTCAAGCTCAAGCAGACGCTGTAAATCTTATTTGTGGTGCTAAAACCCAGTCTAATCCCGAAAATACAGTTGGG GTTCTCACAATGTCTGGGAAAGGTGTTCGAGTTTTGGTCACCCCTACTAGTGATCTGGGCAAGATCTTAGCTTGCATGCATGGACTAGAAATAGGTGGTG AGATGAACCTAGCTGCGGGTATTCAGGTGGCACAGTTGGCTCTTAAGCATCGGCAAAATAAAAAGCAGCAGCAAAGGATTATTGTTTTTGCAGGAGGGTA TACGCAGCTATATTTCATGCTTTATCGAAAATGTCATATTTGTAGTTATTTTTGGTCTTACATCTCATTCAATTTTTCATAGTCCTGTTAAGCATGAAAA AAAGATGTTGGAGATGATTGGGAGAAAGTTGAAAAAGAATAGTGTAGCTCTGGATATTATCAATTTTGGAGAAGAAGATGAAGGGAAAACAGAAAAGCTG GAGGGACTCCTTTCAGCCGTTAACAATAATGATGCTAGCCACATTGTTCATGTTCCAGCTGGGCCAGATGCTCTTTCTGATGTACTTATAAGTACACCTA TTTTCACCGGTGATGGGGAAGGAGGAACTGGGTTTGCTGCAGCTGCAGCAGCAGCTGCAGCTGGTGGTGTATCTGGCTATGAGTTTGGAGTGGATCCAAA CTTGGATCCTGAACTGGCTCTTGCTCTAAGGGTTTCAATGGAAGAGGAGAGAGCCAGGCAGGAAGCAGCAGCCAAAAAGGCTGCAGAGGATGCTTCCAAA CAAGAGAAAGGAGGTGAACACCAAGTCAGCTCACAAGATGCAACAATGACAGAGCGTGCCAGTGCAGCAACTTCTGAAGCTGAGAATAAGACAAGTGATT TGATGGATGATGAGAATGCTTTGCTAGAGCAGGCACTTGCAATGTCAATGGATGATCCTGTCATTAACCATGACGTGAAAGATACAGATATGTCAGAAGC AGCTTCAGATGATCCTGAGTTGGCTTTAGCTCTCCAATTGTCCGTCGCAGATAGTACAAAGGATGCAGCAAGCCAGTCAGACATGAGTAAATTGTTGGCG GATGAATCCTTTGTATCTTCTATCCTTGCATCGCTTCCCGGAGTCGACCCAAATGATCCTTCTGTCAAAGATTTGCTTGCCTCCATGCAAAGTCAGTCTG AGTCTCAGCAGAAGGACGAGGACAAGCCATCATCTAATGAAGAGGAGAAGAAATAATCTTGACAGCCACTTTGCACTGTCAGATTGCATTTTGTTCTTCT TGAGAGACATTGGTCTCATTGTAGATGGTTGTGTTGTGTTAGTCAGTAACTCTTTTACATGTTCCAACCATCGAGTCTCTTGATTAAGTGTTTGATGCTT TTATTTTTATTTCAAAAAAACTTAAGATTCTCCTTTACCCTGGATGTATTGGTGTCAATCTTTTATGTTAGGGTTATCAAACATGCTAAAGTAGATGCTA GTGCTTAATTGCCTCCCTTATGATTTAGTCATGACTTCTCAGAATCAACAAAACCATCATGTAAACAAAACGGTGAAAGAGTAGTATTAGTGGCTGAAAA CAACATCGAâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_71246; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214839
| Blastp | 26S proteasome non-ATPase regulatory subunit 4 homolog from Arabidopsis with 54.77% of identity |
|---|---|
| Blastx | 26S proteasome non-ATPase regulatory subunit 4 homolog from Arabidopsis with 86.96% of identity |
| Eggnog | 26S proteasome nonATPase regulatory subunit(COG5148) |
| Kegg | Link to kegg annotations (AT4G38630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444843.1) |
| Pfam | Ubiquitin interaction motif (PF02809.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |