| Id Trinity | FTRINITY_DN57746_c1_g4_i11 |
|---|---|
| Name Transcript | Ll_transcript_214712 |
| Sequence | CCACCATTTTCCTCTCCACATCATTAGAACATTACGTAACCGTAAGTTCCAAATTTCCTCTTCACAAATTTGCTTACTTATTCATACTCCCCTTCATTAA ATTTCACTTCATTTCATTTCCATCTTCTTCGTATTACTATAGGGTCTTTCATTTTTCACCATGTGCTATACCTGACACACCTTAACCCTATTATCCTCCC TCCTCTACTTTTTGCTTTCTCTTTTCTTCAACCCAAAACCTTCCTTTTCACTCCCATGGTTCCTCTCCATCATCAACCATGCCCAGCTTTTCCTCTCTCC CTGGGTAATTTCATTTCCCTCTTCATTTTTAATTGATGTAGTTAATATCTTAGCTTTTTTTATAAGCTGATATTACTATATTAGTATTTGTTGTAATGAA ACTCCAACCATGAACCTTCTTCATTTCATTCTAGCTGCAATTGTAATTACCAGCTCAATTATGGAAATATCAAAATCTATATATATGTCGATTAGTCGAC GATTCTTTGGAAGGAATCTTGATAGCGCAGCCGGAAATGGCGGTGACAGCAGCAGCGACACTGTCGTCGTGCACGACGACAGCCCGACAATTGACACAGT GGAGTGTTACGCCTGCACGCAGTTAGGGGTGCCAGCGTTCCACTCCACCAGCTGTGATAGCTATCAACAGCCGCAATGGGAGGCATCTGCTGGCTCCTCT TTAGTCCCAATCCAGAACCAGCCCAAGGGCTCGACTGTCCGAGTCAGATCTCGGATCAACTCGGGCCCTTTCGGACTGGTTATGGATCCAAGAACAAAAC ACGTGCAAGTGTGGAACCGCGGGCTACTTCTAGCGCGTGGGGTAGCACTTGCAATTGATCCACTCTTCTTCTACGCACTATCCATTGGTAGGGAGGGAAC GCCGTGCCTGTATATGGACGGGTGGCTTGCGGCAGTGGTGACGGTGGCGCGGTCATTTGTGGATGTGGTGCACTTGATCCACCTGTGGCTGCAATTCAAG ATGGCGTATGTGTCGAGAGAATCGCTGGTTGTTGGGTGTGGGAAGCTTGTGTGGGATGCACGTGACATTGCAGCACATTATCTTCGATCTCTCAAGGGGT TCTGGTTCGATTTGTTTGTTATTCTTCCTGTGCCACAGACTGTATTCTGGTTGGTAGTACCAAAACTGATAAGGGAAGAGCAACTTAAAATTATCATGAC CATAATGCTCTTAATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCACTGTATCTGCATGATGAGAACAATGCAGAAGGTCACAGGCTACATCTTTGGC ACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCCGGAGGGTGCTGGTATGTCCTTGCAATTCAACGCGTCGCGT CGTGCATTCGGCAGCAATGTGAAAGAACTCATGGATGCAATCTCTCTTTGTCTTGTTCTGAAGAGGTATGCTACCAATTTATGTCATCAGATGGAGCAGT AGGAACTCCATGTGGTGGAAACTCAACAATTGCTGCAAGAAAGCCTTTGTGCTTAAATGGTGAAGGACCTTTCAAATTTGGAATTTACCAATGGGCACTT CCAGTTATATCCAGCAACTCCTTGGCTGTTAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAATGATCTTGAACCCACAA GTGAATGGCTAGAAGTGATTTTCAGCATATGCACCGTACTCAGTGGACTACTGCTTTTCACTTTGTTGATCGGTAACATCCAGGTATTCTTACATGCAGT GATGGCAAAGAAGAGAAAGATGCAGCTGAGATGCCGCGACATGGAATGGTGGATGAAGAGAAGGCAGTTACCATCGCGATTAAAGAAAAGAGTTCGACAT TTTGAACGTCAGAGATGGACAGCCATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTGCCTGAGGGACTCAGAAGGGACATCAAGCGTTATCTCT GTCTTGACCTCATTAAAAAGGTAACAAATCTACGACCAAATAAGTTGAATAATAAAGAAATGTTTGAGAGACTTAATTTAGAGGAGGAATCGTCTCGCTT ATTTGAGAGTTGGATAGAAGAAATGTTTTGAAGATTACGTCAAGTCTTCTAAAATACTCTATAAATCTATTTTCATGTTTTCTGAAAACAAACACATCAT ATTATCTGAATGCTCCTACTAAGATTTTGTAAGTATATTTTTATTCATTTTTTATTGTTAATTATATTTTTAAGATTTCTAAGGGGGTAAAACAATGTTC GTCCATGTGATTTACCTTTGTTAACACATTATTCTTCTCTCGTCTAAATAAGAGAGGTGACATACAATATAAAATATCTTAAGTTGGATTGTTTGTTAGA TTTGGAGGATATAATTATTTATGGACACCTAATATTTAAGGTTTCTTAGGAACACTTAAAATAGTAATATGCTTTTATGTTATGATATCTTTGATCATTC AAGGTAAGATATAAACTTGTTTAAAGATTCACAGTAATTCACCACTCTCACTGTTATATGTCCACGCAATTTTTGGGTTTTTTATATGTTAAGAAATTAA TATATAAAATATTTTAAAACAATTAATAAACTTTACCATATGAAATTTTTTTGGATGTCTGACTTCATATCCTTGAAAGTGCATTTTGCCCCTCTATGAA AATGCATTGAATTATAGGGTATTTTATATTGTTAACATATATATTATTTATCATTTTTATATTAATAATTATTGAATTTTGAATAATATAATGTCATTCA ATAATAGATGATGTAATGATAGTATAAGATAATCTATATTAATTTGTATTTATGTTTTTACAATATCAATATGAAATGAAACGTGGAAATAATACTAATA AAATAAATAACCAATAATGTAAGATCGGTTATATGAATAAGGGCGTTATTATAATGAGTTTAAAACTTATACACTGACAGTGTAAAGATCTATACAACAT GCATTTTCACCATCTATCATTCATTTATATTACATTTTTTGAAAAGTCAACAAGAATTAAATATCAATGGTGAAAATGTATAAAACTCATACACTGTCAA TACATACATATTTTTCTTTATTACGATATAGCTCCTTCAAAACATAATTATATATGTTTCTCAGGTCCCACTGTTTCACAATTTGGATGATCTCATTCTT GACAACATATGTGATCGAGTTAAGCCCAGAGTCTTATCAAAAGATGAAAAGGTACTTAACAATATAAACAATTATCACATGAGACCCACCAATTTTTTCT CATGAAATCCTTATAATAAAAAACAACCACAATCTTATGAGTTTATGACACAGATAATCAGAGAAGGTGACCCAGTACCAAGAATGGTATTCATTGTTCG TGGCCGCATAAAGCGCAACCAAAGCCTCAGCAAAGGTATTGTTGATTAGCATGACTCAGAAACTGTTATGATTCATTAGGTAATAAAGAGTCAATATGTC TATTAGGAATGTTTCACTTTCTATGTTGTTGGAGCACGTACTTGACTCACTATACTATTCATGTAGGAATTTATTTTTTTTCTACTATTTCATATACTAA ATTTCCTCGCTATACTTCTGCTTGCTACATAACCAATAGGTATCGTAGCCTCGAGTATCTTAGAACCCGGAGGGTTCTTAGGTGATGAGTTACTTTCATG GTGTCTTCGCCGCCCTTTTCTAGAAAGACTCCCAGCTTCCTCAGCCACATTTACATGTCTTGAATCAGCTGAAGCGTTTGTTCTTGATGCTGAACATTTG AAATACATCACTGATCATTTTCGGTACAAATTTGCAAATGAAAGATTAAAGAGAACAGCAAGATATTACTCATCAAATTGGAGAACATGGGCTTCTGTGA ATATTCAAATTGCTTGGAGACGTTACAGGGATAGGACTAGAGGACCAGTGACCCCTGTAAGGGATAATAATGAAGGAAGCACTGAACGAAGGCTCTTGCA ATATGCTGCAATGTTTATGTCAATTAAGCCTCATGATCATCTTGAATGAAAAGTGATAGTGGTGTGTGATTGTTTTAGTTTTGTTTAATTCATCATTAGA CTTTTGAAGTTTGCATCGGAGTGAAGTTATGGTATTATTGGTGAAATGTAAAGGAGAATAAAACTGGAAAAAGAGCAATAGCTATTGAATAAACATTTGT ATTTATGCATGCATTTCATTCCTGTCTCTAACCTATTTCATAGGAAAGCATGGAAAAGATAAGCCACACATGCAGTCAAATATGTTATTTATGAGTTGGG CTCCGAAGTAATGGAGAGACAAGTGATTTTTTCCTTTGTCTTTTAAGGGTAAAAGTGTAATATTATTTTAAATATAATGGATATAAATGTATGCATATTA CTTTTTCTTTAAAAAAAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71296; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214712
| Blastp | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 77.87% of identity |
|---|---|
| Blastx | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 78.19% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT5G15410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461471.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |