| Id Trinity | FTRINITY_DN57746_c1_g4_i9 |
|---|---|
| Name Transcript | Ll_transcript_214709 |
| Sequence | TTATTACACTTTTTAAATTGTTTCAAAAGTACATCACATTTAAGAGTACCATCTTTTTAAGAGCAAAAATTCTCCATTAATGAAGAGATAAATACTACAA AAACAAATGAAAAAAGAATATGATAAAAATATTTTTACCCTTTTATATATAATGAAATATTACATTTGTCATTGAAAATACAGAGAAAAATAGATATTCG TCTTTCCTTGTTCAATTTTTATGTCCACCTTCCTGTTCAAAAAATATTATTGAAAATTATAACATCATAAATAACATGTTAGTGTACTTATAAGGGTACT CAATGATAAATATCTCATGCAATCAATTTTCAAGGATTAATATATTTCATTTAATATTTTTTTAAAAATTATTTTGTCACTAGTATTTTAAGGAACCAAA TTGATAAATGCAAAAACTTAAAGAATCATAATGATTCTTCATTTTTTTTATTACATTATAGTTTATGACTTTTGCTTGCCTTGTAATATGATAGGAACCA TATATCCGATGTTACATCATAGTTTATTACATTATATAGTTTAATGATGTTGTCTAATGCGATTGCATTGCATCTTGATATGGCCTAAGTATAAGTACAG TTGAGTTGCAGCTCGTTGCGGCATCTACAATATTGAAACATTCCTACACTTTTTAGTCACTGTTTCATACTAGCTCAAAAAATGAGAATGATTCTGAATT TGTATTGTGAAGGTATTCTTACATGCAGTGATGGCAAAGAAGAGAAAGATGCAGCTGAGATGCCGCGACATGGAATGGTGGATGAAGAGAAGGCAGTTAC CATCGCGATTAAAGAAAAGAGTTCGACATTTTGAACGTCAGAGATGGACAGCCATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTGCCTGAGGG ACTCAGAAGGGACATCAAGCGTTATCTCTGTCTTGACCTCATTAAAAAGGTAACAAATCTACGACCAAATAAGTTGAATAATAAAGAAATGTTTGAGAGA CTTAATTTAGAGGAGGAATCGTCTCGCTTATTTGAGAGTTGGATAGAAGAAATGTTTTGAAGATTACGTCAAGTCTTCTAAAATACTCTATAAATCTATT TTCATGTTTTCTGAAAACAAACACATCATATTATCTGAATGCTCCTACTAAGATTTTGTAAGTATATTTTTATTCATTTTTTATTGTTAATTATATTTTT AAGATTTCTAAGGGGGTAAAACAATGTTCGTCCATGTGATTTACCTTTGTTAACACATTATTCTTCTCTCGTCTAAATAAGAGAGGTGACATACAATATA AAATATCTTAAGTTGGATTGTTTGTTAGATTTGGAGGATATAATTATTTATGGACACCTAATATTTAAGGTTTCTTAGGAACACTTAAAATAGTAATATG CTTTTATGTTATGATATCTTTGATCATTCAAGGTAAGATATAAACTTGTTTAAAGATTCACAGTAATTCACCACTCTCACTGTTATATGTCCACGCAATT TTTGGGTTTTTTATATGTTAAGAAATTAATATATAAAATATTTTAAAACAATTAATAAACTTTACCATATGAAATTTTTTTGGATGTCTGACTTCATATC CTTGAAAGTGCATTTTGCCCCTCTATGAAAATGCATTGAATTATAGGGTATTTTATATTGTTAACATATATATTATTTATCATTTTTATATTAATAATTA TTGAATTTTGAATAATATAATGTCATTCAATAATAGATGATGTAATGATAGTATAAGATAATCTATATTAATTTGTATTTATGTTTTTACAATATCAATA TGAAATGAAACGTGGAAATAATACTAATAAAATAAATAACCAATAATGTAAGATCGGTTATATGAATAAGGGCGTTATTATAATGAGTTTAAAACTTATA CACTGACAGTGTAAAGATCTATACAACATGCATTTTCACCATCTATCATTCATTTATATTACATTTTTTGAAAAGTCAACAAGAATTAAATATCAATGGT GAAAATGTATAAAACTCATACACTGTCAATACATACATATTTTTCTTTATTACGATATAGCTCCTTCAAAACATAATTATATATGTTTCTCAGGTCCCAC TGTTTCACAATTTGGATGATCTCATTCTTGACAACATATGTGATCGAGTTAAGCCCAGAGTCTTATCAAAAGATGAAAAGGTACTTAACAATATAAACAA TTATCACATGAGACCCACCAATTTTTTCTCATGAAATCCTTATAATAAAAAACAACCACAATCTTATGAGTTTATGACACAGATAATCAGAGAAGGTGAC CCAGTACCAAGAATGGTATTCATTGTTCGTGGCCGCATAAAGCGCAACCAAAGCCTCAGCAAAGGTATTGTTGATTAGCATGACTCAGAAACTGTTATGA TTCATTAGGTAATAAAGAGTCAATATGTCTATTAGGAATGTTTCACTTTCTATGTTGTTGGAGCACGTACTTGACTCACTATACTATTCATGTAGGAATT TATTTTTTTTCTACTATTTCATATACTAAATTTCCTCGCTATACTTCTGCTTGCTACATAACCAATAGGTATCGTAGCCTCGAGTATCTTAGAACCCGGA GGGTTCTTAGGTGATGAGTTACTTTCATGGTGTCTTCGCCGCCCTTTTCTAGAAAGACTCCCAGCTTCCTCAGCCACATTTACATGTCTTGAATCAGCTG AAGCGTTTGTTCTTGATGCTGAACATTTGAAATACATCACTGATCATTTTCGGTACAAATTTGCAAATGAAAGATTAAAGAGAACAGCAAGATATTACTC ATCAAATTGGAGAACATGGGCTTCTGTGAATATTCAAATTGCTTGGAGACGTTACAGGGATAGGACTAGAGGACCAGTGACCCCTGTAAGGGATAATAAT GAAGGAAGCACTGAACGAAGGCTCTTGCAATATGCTGCAATGTTTATGTCAATTAAGCCTCATGATCATCTTGAATGAAAAGTGATAGTGGTGTGTGATT GTTTTAGTTTTGTTTAATTCATCATTAGACTTTTGAAGTTTGCATCGGAGTGAAGTTATGGTATTATTGGTGAAATGTAAAGGAGAATAAAACTGGAAAA AGAGCAATAGCTATTGAATAAACATTTGTATTTATGCATGCATTTCATTCCTGTCTCTAACCTATTTCATAGGAAAGCATGGAAAAGATAAGCCACACAT GCAGTCAAATATGTTATTTATGAGTTGGGCTCCGAAGTAATGGAGAGACAAGTGATTTTTTCCTTTGTCTTTTAAGGGTAAAAGTGTAATATTATTTTAA ATATAATGGATATAAATGTATGCATATTACTTTTTCTTTAAAAAAAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71296; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214709
| Blastp | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 82.05% of identity |
|---|---|
| Blastx | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 73.94% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT5G15410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461471.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |