Id Trinity | FTRINITY_DN57762_c1_g4_i16 |
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Name Transcript | Ll_transcript_214588 |
Sequence | TTGTTCATTTATTTTATCCTCCCAAATGCATACACATGTAGATGCACACAAAATTTATACAAAACAATCAACTTCAATGATGGGTATAATTTCTGCTGCT TTTAATGTATATTTTTTAGGTTACAGGGACACAATCAATAGCTTTTCATCCTGATGGAAGAACCCTATTTACCGGACATGAGAATGGTTTGAAGGTGTAT TCATGGGAACCTGTTATATGTCATGATACTGTTGATATGGGATGGACAAAACTTGGTGATCTCTGCATTCATGATGGAAAACTTTTGGGGTGCTCACACT TTCGAAATTCCGTTGGAGTCTGGGTAGCAGATATATCGCTTATTGCGCCATATGCTGATGCCTCTGATCCTAAGAAGAAAAGTGAAGATACAGAACAGAA ACTTGGCCTTCATGGAAGTAAACTGAACAAAGTAGAGGATGATGTGGGACCAACTTCTGGGCTCCACAGTATGTCTCCTGATGAGTCAAAAGAGATAAAG AATATATACATTGACTGTAAGCCACTGACTCTTTCTATCCCTTAGTAGCTCCTTGAAAATTGAAATGATGTATTAATTAGTTGTTGCATTTAATGGCAAG CTATTGCCTGCCTATTAATAATTCCTCCGAGCGCCGACTGTGACATTTCTTAATTCTCGTCTTTTCGATTTCCTTATTGAAACTATTTTGCTTGCTTTCG TAAGTCTCTCTTATTCTTTAGTGTCAAGTAATACCCACATGGGCATTGTTTGACTTGATAGACCTAATTTGTACTAACCTCCTGATGCTTCACATTTGAC TGGTTTATCTATGTGCTTTGTAGTGTAACCTCCATTAGAAACACGATATGATTTTGGTTTATTTTTCATTTGGGTTTGGCTTTGTTAAAGTTCTGAAACA ATTCAGCTTCAAAAATAGAGTTTTCACCATATAGAACTTCTAAGCAGAATGAAAGATTGGTGCTTCCATTGTTTTAGTGGCTTGTTTCAGTGAAGGATGT ACTGACATTTTTCTTGTAGTAGGTCAAGCTGTAAATTGAACTTTACATGCAAGCATGTAGTGAGATCCTAACATGATGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_71414; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214588
Blastp | Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 52.63% of identity |
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Blastx | Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 49.35% of identity |
Eggnog | Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC) |
Kegg | Link to kegg annotations (AT5G23430) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426191.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |