Id Trinity | FTRINITY_DN57768_c3_g3_i3 |
---|---|
Name Transcript | Ll_transcript_214347 |
Sequence | AAAGCGTTGGTCTAGTGGTGTAAGGCCCTACTTGATCCCCAAGGTCGAAGGTTGGATTCGTGGGAGCGATACTTGTTGGGAGGGGCAATCATGAAACCCG AAAGAGAGCACAAGGGTTATGTAAGTGGTAGCTTGTCGGAGAAGTCGGATGAGGGTAAGATCGAAGATTCTGCAAAATCGGATAGTTCGATGGAAGAAGG CTTAGCTGATTCCATTCATGATACTTTAGATGTTGATACTAAGTTCAATAGTAATGAAAAGGATGTAAAGAATGCAAACAATGGACATGAAAGATTTCCG AATCAACCCGATGGTAAACAAACCAATGAGAAAGGAGTTTTTGAGAATGGTGTTGATGTCAATGTCAACAAAAATAAAGTGAAAAAAGCAATAGGAAGAG AACAAGAGGAACCGAAATCTCAAACTTGTCATGAAAATGGGTCTGCATTCGCTGGGAAAATGACGTCTAATTCGCAAAATGGACAACGAAGCGAGGCAGA GAGGTTTTGGAGAAAGCCGAGAACCGAAATGGAAAGTGTGAGATTTTCCACTTCGAATTATCCTTATGAGGGAAATTCAAGTTTTTCTCATAGCTATGTT GAACCGTGGCGGCGTCATGAAGAAACAGATGGTGCAAACAAGGTTCAACACCTTGAGCAAGATCGAGCGGAGCTTCTAAGGAAGCTGAATGAGTTGAAGG GTCAGCTGAGTCAGTCTTCCGAAGTGGTTAAGAGCACGAAAGAAAAGGTCTGGCTTGATAAAAGGATGATTCCTCCAAATCCTTATGCTGCCTCTGATCC TTGGTTTTCAGATGGATCGCCTCGGTTGAACAGAAATGCAAGGCAATTTTTTGGTACCGATAAGCATGTGGCAGGTTCCAATTATTTCAATTATCATTGT GAGCCATCATATCCTTATACAAGTAGTCATGAAATGGCTATGCCTAATTTCCATCCTTCAATGCATAATCTGAGTCACATTCCAGGATATGGAGATCCTT TTGCATCTCAAATGTTGAGGAAAGGTCCACAACCACATCAGTTCCCACAAAAACCGATGCACCCGTACTTCTCTGGCCGCTATGTTGAAACTAATCCAGG TTCATATGAACCATATGCACATAGTTCAATGATTCACCAGCCTGCTTGCTCCTGTTTTCGTTGCTATGACAACAAACAAAGAGGTTCGGTGCCAGCACCT CCTGTTCCGAATGATCCTATGTCGTACCATCATGAGTTACCAGCAGCATTTGGTCCACATGTTCATACTTCTAGGACTGCTGTCGTTCCTCCTTTGAGTT TTTACGAAAAGCAATTGCATAAAAGATGGCCCAGTGACTTCAACACCGAGATGGGTGGTTTCGTTCGTAACCGTCCTCAAAGAGTGATGTTAGCTACTGG CCGTCAGCGTTGCCGTCCTGTAGCTGGTGGTTCGCCCTTCATCGGATGTCATAAGTGCTTTGTGTTACTGCAACTGCCTAAAAAGGCATTGGCGAAGGTG AAAAACCATCAGCAGAAAGTGAAGTGTGGGGCTTGTTCTTCAGAAATCAGCATTGCTATCATCAATAAGAAGTTAGTTATTACTCATCATTCCGAAATGA AGGGAGTTCATACAAGGATTGATGATTTCTCTAATATGGTTGTGAGTAGCCATGTGTTACGTTCCCATTGTCATGTGAGCAGATTTGGTGCTAACTTCTC ATCTGATGAATATTCCGGTTATGATTTTCATTCCGTAGATAGAGAACCTCTTTTGTTGATTTCAGACCTTAGCTTGAACTCTAACCAATCCGAGGACATG CAAAGTTTTCATTCTTCTCCTATTACATCCGAAGATGAAGATAGTCCTGAAGTGGTTACCGAGTCCATTAATCACCCAACCAAAGCATCGGTATCTCCTC CACCGGCCAGTTCACCTTTGGAAGAGCACTTTGGTTACTCAAATAACAACGCTGCAGTGAACCGATCTGGAAAAGGCAACCGAAGTAGTCGTTTGGAGCA AGATAAGGGAAAGCTTGATAATATCATAACGCGGCAAAATTCATTGAAGGATGCTGCAGTTGCAACTGAGTTGGATGTCCATGATTATTCTAACATGGGT GTCTCCCAGGATTCTGGAGATGCTGGCAGAGAACAAGGTTATCCTAGATCCAACAAAGGGGGTGAATCATTTATCGCAAACATTATCAAGAAAAGCTTCA GAGATTTCTCGCGGTCTAATCAAACGGATGACCATAGCAAAATCAATGTCGCTATTAATGGACAGCCCTTGTCAGCTCGTGTGGTTAAGAAGGCTGAAAA GCTAGCTGGACCAATCCAGCCTGGAAATTATTGGTACGATTTTCGGGCTGGATTTTGGGGTGTTATGGGTGGACCTTGTCTCGGAATAATCCCGCCGTTT ATAGAAGAGTTCAATTATCCCTTGTCAAACAAATGTTCAGGTGGAAATACAAGTGTTTTTGTAAATGGTAGGGAACTTCATCAAAAGGATTTAGACTTGC TTGCTCTACGAGGACTTCCCACTGAAAGTGATAGATCTTATATCATCGAAATTTCCGGGAGAGTCCTGGATGAAGACACGGGAGAAGAGCTAGACAGCCT CGGGAAACTCGCACCAACAGTAGAGAAAGTGAAGCATGGATTTGGCATGAAAGCATCAAGAGCAGTTCCATAATTAAAGTGTAGAAATGAATATTCTCTA ACAGCTATGAGAAGGTGAATTTCATTTCATCCTTCTGGTGATTCAGAAACACTGTTTTGGACCAGATCATGGAAAAAAAAATTGGAAATTTTTCTATTGT ACTGCAAAGTCTTCTGTGATGTGTAAATTTTCATTTCTTCTTTAATGTTTTTAGAAAAACTGCATTAGAAATTATGTGCTTGATGTTCATGATATCAAGT AGTTTAGAAAAAGTTAGAGTATGTTAAGTCTTGCATCTAATGTAGAATTTTATGTATACAAATTTGTAATATATTTCCTTATCAGTTTTTAGTAGTTATG CATTTACAGTGACTCATTCGAATGGATTCAAGGAGATAAGTTATTAAACACTATATAGATTTAAGAAGATAAATTATCTTCTGATATGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_71456; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214347
Blastp | Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 31.43% of identity |
---|---|
Blastx | Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 31.43% of identity |
Eggnog | Guanine nucleotide binding protein (G protein) alpha(ENOG410XNVQ) |
Kegg | Link to kegg annotations (AT2G23460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424022.1) |
Pfam | Probable zinc-ribbon domain (PF11331.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |