Id Trinity | FTRINITY_DN57768_c3_g3_i7 |
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Name Transcript | Ll_transcript_214356 |
Sequence | ATTTTTTGTTGGTAAAAGCAATGGTATATTTGGGAGATTAATCTTAGAACATCGTAAGATTCCATAGGAAAATTTGTCCCCTCTGTAAAACACTACCACC ACTCTTTTTTATTTATTTATTTATATATTTGTGGTCTTAAGGGGAATAAAGGAAAAGAAGAAGTAGCAGCTGCAAAAGAAAAAGGAAAAAAGTGATTATT TTTCACTTTTAGCTTATTGTTTGTGAGAAGAAAAGCTTTTGTTAACCAATAATATCACAGCACACAACACAAGCTTAGTTACTTCCCTTTCCAACGTTGT TATTGTTGTTACCAAGAAGCCAAGTTTCCACTTTTATGTTTTAATACAAACACACTTTCTCTTTTTCTCATGTTCTTCTTCAACTTCATTGTTCTTACCT TCTTCTTCTTATGTGAGTTATAGTTCTTCTTCTTCTTCTTCTTATGGATGAGTCTGAGAAACTAAGATTGGTGAGGTGCCCCAAGTGTGATAATCTTCTT TCTGAACTTGCTGATTATTCTGTTTATCAATGTGGTGGTTGTGGTGCTGTTCTCAGAGCAAAGCACAAGGGTTATGTAAGTGGTAGCTTGTCGGAGAAGT CGGATGAGGGTAAGATCGAAGATTCTGCAAAATCGGATAGTTCGATGGAAGAAGGCTTAGCTGATTCCATTCATGATACTTTAGATGTTGATACTAAGTT CAATAGTAATGAAAAGGATGTAAAGAATGCAAACAATGGACATGAAAGATTTCCGAATCAACCCGATGGTAAACAAACCAATGAGAAAGGAGTTTTTGAG AATGGTGTTGATGTCAATGTCAACAAAAATAAAGTGAAAAAAGCAATAGGAAGAGAACAAGAGGAACCGAAATCTCAAACTTGTCATGAAAATGGGTCTG CATTCGCTGGGAAAATGACGTCTAATTCGCAAAATGGACAACGAAGCGAGGCAGAGAGGTTTTGGAGAAAGCCGAGAACCGAAATGGAAAGTGTGAGATT TTCCACTTCGAATTATCCTTATGAGGGAAATTCAAGTTTTTCTCATAGCTATGTTGAACCGTGGCGGCGTCATGAAGAAACAGATGGTGCAAACAAGGTT CAACACCTTGAGCAAGATCGAGCGGAGCTTCTAAGGAAGCTGAATGAGTTGAAGGGTCAGCTGAGTCAGTCTTCCGAAGTGGTTAAGAGCACGAAAGAAA AGGTCTGGCTTGATAAAAGGATGATTCCTCCAAATCCTTATGCTGCCTCTGATCCTTGGTTTTCAGATGGATCGCCTCGGTTGAACAGAAATGCAAGGCA ATTTTTTGGTACCGATAAGCATGTGGCAGGTTCCAATTATTTCAATCATCATCATGATCCAGCATATCCTGATACAGGTGGTCATGAAATGGCTATGCCA AATTTCCATCCTTCGATGCACAATCCGAATCACATTATGGGGTATGGAGATCCTTTTGCGGCCCAAGTTCTAGGGAGGGGTCCACAATCGCATCAGCTAA CTCATCAATATCCCCCAAAACCCTTGCATCCCTACTTTTCCGGACACTATGTTAATACCAATCCAGATTCATATGAACCATTTTCCCATAGTTCAATGCT TCACCAGCCGTCTTGCTCGTGTTTTCATTGCTATCAAAACAAACGAAGAGGTTTAGTGCCGGCACCTCCTGTTCCAAATGATCCTATGTTATTCAATCAT GAGTTCCCAGCGGCATTTGGTCCACATATTCATAATTCTAGAACGGCTGCAATTCCTCCAGCAAGTTTTCGCGAAAAGCAATTACATACAAGATGGCCTA ATGATTTAAACTCTGAGATCAGTGGTTTTGTTCGAAGCCGTCCTCGGAAAGTGATGCTAGCCAATTCCTGTCAGCATTACCGTCCCGTAGCTGGTGGTTC GCCCTTCATCACATGTAATAATTGCTTTGAGTTACTGCAACTGCCTAAAAAGGCACTGGTTGTAGCGAAAAATCATCAGCAGAAAGTGAAGTGCAAGGCT TGTTCATCAAAAATCAGCATTGCTATCATCAACAAGAAGCTAGTTATTACTCATGATTCAGAGATGAAGGCAATTCGCACAAGGGTTGACGATTTCTCAA ATGAAGTTGTCAGTAGCCGTGTGTCACGTTCCCATGGTCATGTGAACAGGGTTGGTGCTAACTTCTCATCCGATGATTATTCCGGTTATGATTTTCATTC ACTAGATAGGGAACCTCATCTGCTGGTTGCTGACCTTAGCTTGAACTCTAACAAATCCGAGGACATGCTAAGTTTTAATTCTTCTCCTATTATGTCCGAA GATGAAGATAGTCCTCAAGTGGTTAATAAGTCTATTCATCAGCCAACCAAAGCATGTATGTCCCCTCCACCGGCCGGTTCACCTTTGCAAGAGTACCTTG ATTACTCTAGTAACAACAATGCATTGAACCGGTTTGGAAAAGGCAACCAAAGTAGTCGTTCAGAGCAAGAGAAGGTGAAAACCGAGAAGATCACAACACG GCAAAATTCATTGAAAGAGGCTGCAGTTGCAACGGAGATGGATGTCCATGATTATTCCAATATGGGGGTCTCCCACGATTCCGGGGATGCAAAAGGAGAA AATGATCATCCTAGATCCAACAAAGGGGGTGAGTCATTTTTCGCAAACATTATCAAGAAAAGCTTCCTAGATTTCTCTCGATCTAATCAAACAGACGACC GTAGCAAAATCAGTGTCACTGTTAATGGGCAGCCATTATCACATCGCGTGGTTAAGAAGGCTGAAAAACTAGCCGGACCAATCCAGCCCGGAAATTATTG GTACGATTTTCGGGCTGGATTTTGGGGCGGCATGGGTGGACCTTGTCTCGGAATAATTCCGCCATTCATAGAAGAGTTCAATTACCCCTTGCCGGACAAA TGTTCGGGTGGAAATACTTGTGTTTTTGTAAATGGCAGGGAACTTCATGAAAAGGATTTAGACTTGCTTGCTTTGAGAGGACTTCCCACTGAAAAAGATA GATCTTATATCATCGAAATTTCCGGTAGAGTCCTGGATGAAGACACGGCAGAAGAGCTAAACAGCCTTGGAAAACTTGCGCCAACAGTGCAGAAAGTGAA GCATGGATTTGGCATGAAAGCACATAGAGCTGGTCCATAATTAATCATGGAACAAGTCTAGAAATTTTTGCAACATTACTTGGAAATTCTTCTATTATAA AGTTTAAGTGTGTCTCATTGCATGACCTGAATTTAGATTACATATGTAATGCTTAAATTTATTTCTTATGTTAAAAAAACTGCATTAGAAGTTCTATGTT TGATGATATTAAGGGTCGGGTTTTCTACGATCAAATTTTGATATTTATTAAAAAAATCGGGCAGTAGGAAACAAAATTAAAATTATATTATTTTTTATTA TGTGTCAAAATGTGATTGGATGAGATAGAGTTGGGTACTTTGGGAATCCCAATGATTAGTTTAATCGATACAAATTGTGACCTAGGGAGGTAGGGCTAAG CGGAGCGAAAAGGGTTTCTTGTGAGATGGGAAATGAAAACTATTAGCCCCACACGGGATTTGTCAATAAGTGATTGTCTGATAATGAGGAAGGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_71456; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214356
Blastp | Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 38.71% of identity |
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Blastx | Protein Ycf2 from Barbarea with 83.78% of identity |
Eggnog | Guanine nucleotide binding protein (G protein) alpha(ENOG410XNVQ) |
Kegg | Link to kegg annotations (AT2G23460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419139.1) |
Pfam | Probable zinc-ribbon domain (PF11331.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |