| Id Trinity | FTRINITY_DN57773_c2_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_214549 |
| Sequence | TTTTGAAATAAATTGAAACAGATAAAGAAATCACTGTTGCGTCATTCTCTACCATCAACCTCCGTCGTGTGACGTAATCCTCCGGCCACAGCAACGCAAC GCTGCGTTTAATGAATCAATTATCATTATCAACGAGACTCGCATAAACCCCACTACTACTTGATCAAGGCTCAAAGAGATTTCAGAGAATGTTGTTACGA AGAAGGTGCTGCTGGATAGCTCTATTATTGATTGCAGCAACTACTGTTGGATCTGCTCTGTGCAGTGTTAATCCTCATCGCATTCTTTTAGATACAGATG TTGGCACTGATGACTTATTTGCACTTCTCTACCTTTTGAAGCTCAATACATCACAATTTCAATTGGAGGCAGTGACGATCAATGCAAATACTTGGACAAG TGCGGGCCATGCTGTGAATCAAATTTATGACATACTTTACATGATGGGAAGAGATGATGTTGCTGTTGGTATTGGAGGTGAAGGTGGAATACTTCCAAAT GGTACAATACTCTCTAATGTTGGTGGTTATCTTCCAATCATTGATCAGGGGATGACAACAGCGGGAAATTGCAGATACAGGCGGGCCATTCCGGTAGGAC TTGGAGGGCGCTTAGATGTCGATGCTAACTATGGCATCCGCAAAGCTTTCCTTCCGCAGGGGAAAAGGAGATATACACCACTACGACAACCAACTGCTCA GCAAGTGCTGATTGATAAAATATCTACTGGTCCCATAACTGTGCTTATAACTGGAGCACATACAAACTTTGCCATTTTCCTTATGAGTAACCCACACCTC AAGAAAAATGTGAAGCACATCTATATCATGGGTGGTGGTGTAAGGTCAAGCAACCCAACTGGTTGTTGCCCAAAAAATGCACCGTCTTCCTGTGTGCCTA GCCAGTGTGGTGACCATGGCAATTTGTACACGGATTACAATACCAACCCTTATGCAGAGTTCAATATTTTTGGGGATCCTTTTGCAGCATACCAGGTGAT TCATTCTGGAATTCCTGTCACCCTTGTTCCTCTTGATGCAACAAACACAATCCCCATCACTCAACAATTCTTTACTGCATTTGAAAAGAGTCAAGACACA AATGAGGCACAATACTCTTTCAAGTCCTTGAAAATGGCTCGTGATACTTGGTTTGATAATGAATTCTATTCGAGTTATTTCATGTGGGACTCTTTCACAG CTGGTATAGCTGTTTCAATCATGAGTAAATCTAATAACGTTGAAGGCGAAAATGAATTTGCTGAAATGGAGTATTTAAACATAACTGTAATCACTTCAAA CAAACCCTATGGGATATCTGATGGCTCCAATCCATTTTTTGATAACCGGAAAGTTCCGAAGTTCAATCTCGAGAAAGGTGGGGTGCATAGTGGTCATGTT CAAGATGGACTTAGAGACGCACTTTGCTTTGTGAAAAATGGGAAAGGGAGATGCCAGGATGGTTACACCTCAGAGGTAAATGGTCCAGACTCAGTAAGAG TACTTGTTGCCACAAAAGCAAAGCCTAATCAGGATGCTGGGAGCTCACTTGACAGGGAATATTACATAAACTTCTTGAATGTTCTAAAGAGACCACAACA AGCTGGGAGGTTTAACTTTGCTACACAGTTTCCTAACTACAGAGAAGTAACTTACAAGCCAGATTTTCAAGATAAAAGACTGGGGAAACCTGTTGTGTTT GACATGGACATGAGCGCCGGAGATTTTCTTGCTTTGTTTTACCTCTTAAAAGTGCCTGTTGAAGTGATCAACCTTAAGGCAATCATTGTGACCCCAACTG GATGGGCAAATCCTGCAACAATAGATATCATCTATGATTTACTGCACATGATGGGTCGTGATGATATCCCGGTTGGTCTAGGAGAAGTTTTTGCAATGAA TCAATCAGATCCAATAACTTCAGCTGTTGGTGAATGCAAGTATGTTAAAGCTATTCCCCATGGGAGTGGTGGGTTTCTGGACTCCGACACTCTGTATGGT CTTGCTCGTGATCTACCTCGTAGCCCGAGAAGGTATACAGCAGAGAACTCTGTGAAGTTTGGGGCTCCTCGGGATACGGATCACCCTGAACTTAGACAAC CACTAGCTATGGAAGTTTGGGAATCTATTTTGCAGGCAACTGAACCAATGTCTAAGATTACAATATTAACCAATGGACCCTTGACTAATTTGGCAAAGGT TGTATCGGTGAAAAACATTAGCTCAAGAATTCAGGAGGTTTATGTATTAGGGGGACACATCAGCAAAAATGGCAATGACAAAGGAAATATCATTTCTGTT CCTTCCAACAAATATGCAGAACTCAATATGTTCTTGGATCCCTTAGCTGCCAAGACAGTGTTTGAATCAAAACTTAACATCACACTCATTCCACTCACTA TTCAGCGAAGAGTAAGCTCGTTTTCAACTATTATAGACCGGTTATATGCGACGAGAAAAACACCCGAGGCTGTGTTTTCCAAGCGTCTGCTGTCAAGGCT ATACCGTTTGAAGCAAGTCCACCACAGATATCAGCATATGGACACATTTTTGTGGGAGATTGTGGGTGCAATTGTCATGGCTGATAACACTTCAAGTCTT AATCCAAAATTTGAGGTCAAATCTATCAAAGTCATAGCTGATGGTGTCGAATCCAGAGATGGAAAAATAGTGGTGGATGAGAAACATGGAAAGTTGATCA GAATATTAAGCCATATTGATGCTAAGGCTTATTATGATTTGTATGCAAAGAAGCTTGGTGATCAGAAGCAGTCAGCTAAGGTAGGAAGCTTTGAAGAGCA GAAGAGGGAATGGAATCATCCGCAAGATTTGTTGTCAAAAGTAACTCCTCATACTCTATTTTCAGCTGTATAGACTTTCAGGTGGACCAAAATTTGTGTC ATTAATATTAGTCTCATTTTACTTGTTATTTTAGTTATTCAAACTACAAGTATCAATTGAATTTGCACAAAAAGTTACTAGTATCAATTGAATTTGTTTG TAATACTATTTTAAGTTTTCTTATTATAAAGATCTATTTAGCTTAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71515; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214549
| Blastp | Pyrimidine-specific ribonucleoside hydrolase RihA from Shewanella with 29.57% of identity |
|---|---|
| Blastx | Pyrimidine-specific ribonucleoside hydrolase RihA from Shewanella with 28.79% of identity |
| Eggnog | nucleoside hydrolase(COG1957) |
| Kegg | Link to kegg annotations (Swoo_1120) |
| CantataDB | Link to cantataDB annotations (CNT0000690) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437327.1) |
| Pfam | Inosine-uridine preferring nucleoside hydrolase (PF01156.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |