| Id Trinity | FTRINITY_DN57787_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_215542 |
| Sequence | TATATATGAATATGAATCTGGAGCCAGAAAATTCTAACATGAGCTCCATTATCTTACTAGCAAGAATATTCTTATAGTGCAATTGGTAGGGAGAGCTAAA AAGTTTGAAGTTTGAAAGAAGAAGATGAAGAACTCTGCTTCAGAAACCAGTTTCTATGTTGAGAGTGATGAAGAAGGTGCAGAAGAAAAGGAAATTGAAA ATGATGGGAATGATTCAGATTATTCCATTGACTCAAATGGAAACCATCCTCTAAGGAAACCTAGTTCCTATGGCATGCAATGGCCTCAAAGTTATAGGCA ATCCATGGATCTATATGGTAGTGTGCCATCACCGAGTATCGGATTTCTTGGCACCCCCTCCCTATCGAGGTTAGGAAGTTCTTTCATTTCTTCAACTCTG ATAAGGAGGCAGCACACTGCTGAAAAACTACCACCAGTGAAAAAACCTCTGTTACAACCCGAAACAGAGGAGAAACAGCGGCGTAGCTCTCATGCCTTGC TTCCTCCTCTAGTAACTCGGAAGTCTTCGATTAGGAAGGAGAAGGATGCTTCCAAGGTTTGTCATGAAATTGAGTCTGCTGGCCAGTGCACTTTTGGACA AGCTGTGCTTAATGGCATAAATGCCCTTTGTGGTGTAGGAATCCTTTCGATACCTTACGCTGTCCGAGAAGGTGGATGGGTTGGGATTGGCATCTTGCTA ATGTTTGCAGTTTTCTCATTTTATACCGGGTTGCTCTTGCGTTACTGCTTGGATAGTGAAGCTGGGCTTGAGACATACCCTGACATTGGCCAAGCTGCTT TCGGTATCACTGGACGTGTCGCAATTTCAATAATATTGTACTCCGAATTATATGCTTCTTGCATTGAATATATAATTTTGGAGAGCGACAACTTGTCTTC ATTATTTCCGGATGCACACTTAAGTTTGGGTGGAATCGAATTGAATTCGCACATTCTGTTTGCACTCTTTGCCACCTTGGCTATTCTTCCTACTGTTTGG TTGCGCGACCTACGCATTCTCAGTTACATCTCAGCTGGTGGAGTTATTGCATCTATTGTAGTAGTTTTGTGCTTGTTCTGGGTTGGCCTGCTAGACAATG TTGCTATTCCGGGCGAAAGATCAACACTCAATCTTGCAACTTTCCCTGTTGCTATGGGTCTATATGGTTACTGCTATTCCGGACATGCTGTTTTCCCAAA CCTTTACACAGCCATGGCGAACCGAAATCAATTCCCTGCAGTGCTCTTAACATGTTTTGTTATTTGTACCGCCATGTATGTTGGAGTTGCTATCATGGGA TACTTAATATTTGGAGATGGTACACTCTCTCAGTACACACTTAACATGCCTCAGAGCTTAGTGGCCACCAAGATTGCTATGTGGACTACGGTGGTTAATC CATTTACCAAATATCCTTTGATGTTCTAAATGAATGGTTTCACTTTGGTAATTTCAACTGGATTAATTTAATTAAAATTTTCTCATTCTCTTTGAGAGTA GCCCTTCACTCAACCCATCCAGTTCTGTTTTAACATTCCTTAAACTGGCCTGGCTTTTCCCATTAGTTCAATCGCCACCTCCGATAGATATGGTCTTCAA GGTTTTCTGTTTTTTATTATCTTATAGATATGCACTACGTAAATAAAGTCCCACATCATCCGCCTCAAGTGTGTGGTATACCTGTCCGAGGTGTGGTTTA TGTGTATGTGGAAAAGGTCATTATGATAAAGAGGGGCATTTTTTGGTTCAATGCATTTGCCAGAATTTGAAAGTTCTACCTACTTTTTCACTATTTTGAC ATAAGAATGATTGTTATACATAAAATATAACTAAGAAATTCAACCATTTTGCACTAAATGAGTAAGGAATGCTACAAAATTAAGAACATTTCTCATCAAC ATTGCCTTCCAATTCAACTGATATGTTCATCCTAACAAGTCCTTCCAATTCATAGAACAAACATGTAGTACCCTTCTGAACTTGAAATGGGTTAGGACAG AATTTAATGTGTTTCATTCGATATGTACTTACGCTGTGAAGATGAAGTAAGAATGTAAGATGTTTCTTCTTAATTAGCACCACATATGCATTGTGTATGG CTCCAGTAGCATTGTGTATGGAGGAGCTGATACCATCAAATGATAGAAAGTTTTACGTATATTCGATCTTAATCAGAACTGCGCTGGTAATTTCTACATT GCTTGTCGGCCTGGCGATTCCATTTTTCGGTCTAGTGATGTCACTGATAGGATCTTTACTCACAATGTTTGTTACCTTGATTATTCCCTGTGCTTGTTTC CTAAGGATACGGAGGGGCAGACTTTCACGCTTTCAGGTAGCATTTTGTATTACAATCATGACAGTAGGTATTGTTGCATCGGTTATTGGATCATACTCAG CGATCTCCGAGATTATCGAGAGTTTGAGAGGATGAAGTTTTGCAGCCGAAATTGTGGACTAAGAGATGTGGCTGATAGTATCTACTCAGAATCCAATTCA TCTTTTATTCTATAAATTTTCCTTTTTTTACTTGCCAACTTTGATTCAACTTTCAGTGGCTTACCCACTTTGTTAGTGTTATTTGTGGTTATTATGGTTT TGTTACCTTATCATAGACTAGTGTTTTTCTCATGTTTGAAGTGTGATGATAATGTACCATAGATATAGTGGTAGAGAACCAGCCTAGAGATTACATTAGA TGACTTTCAAGTGCTAATAGACAATATAGCATCATGAGTGAGGAATTGATGATTGCAATTTGTGAAGTATTTTCATTTTAGACTAAACATGTATATAATG GTCACCAAGTTAGTCCTCTAAAAAATGACCATTAAATAGTATAAAATTAAGTATATGAATTATGTCTTTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71631; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_215542
| Blastp | Amino acid transporter AVT1C from Arabidopsis with 63.86% of identity |
|---|---|
| Blastx | Amino acid transporter AVT1C from Arabidopsis with 64.37% of identity |
| Eggnog | amino acid transport(COG0814) |
| Kegg | Link to kegg annotations (AT2G39130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435521.1) |
| Pfam | Transmembrane amino acid transporter protein (PF01490.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |