| Id Trinity | FTRINITY_DN57798_c14_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_213656 |
| Sequence | CTCTGTTAGGGAGCTAGATTTGCAACAAGGTGCGTGAACGCAAGTGACCCCATACTAATGTGTGGTGAGGAATCCCCGGTGTGTTTGATTATGTAACCTT TTATTGACCCTTCCTCTCAATGCAATAGAAGAAGATACCTTGGATATTGGAATCTTCTTCTTTTCTCTTCTCTTCTCTTATTTCTTCTTCACTTAATAAT AACTTCACAACACAACACAAGTACCGAAACCAAAACAAGACCAAAACCAAAACCAAAAACACAGAATGAGAGCTTTGAATTCTCATTTTGTGCTTATCGA TTTTAACTGCTCCAATTACGCTCCCACCTCAACTCTCACATATTTTAAGAAAAACTCCAACGTCATTTCCAAACTCTCTTCGTCATTTCATCGAACACGT CGTTCGGGTAAGGGAATTCCATCCTGTAACTCCTCTTCCACATGGATTCCCTCGCCGGAGATTCGCCGGCCATCCGATCGCTTCCTTTCAGGAAATGGGT CGCCGGCGAATTCTCAAAGCACGCCCTCCACGTCGCGGCCCGAGTCCGCGACGGAGTTGGAGGTATTTCTGGAGTTGTTGCCTTTGAAGATGAGGAGAGA GTTATATAGGCATGATGAGATTGGAGGGTTGATAGAGGTTGTGATGGATCTTGGTAGAAAACCTCTTGCAAGGTTTCCTTCTGGTGATTGGGTGATTTCA GAACACCCCATCAAGCTTGAAGATTTATCCCATGCCATTTCAAAGGTAGTTTAATATGTTGGATAAAGATCACTTATCCCTATACTTCATCATCCAAATT TAGCTAATATAAAAATGTTAATTTTTTATTTTATTTATGTGTCAATATTTGATTGATCTAAGATATGTAATGAGATATCATTTGGGGAAAGGTGATCAGG CTCAACATTTTCTGATGTTTTTGCCCACTATAATAATGGTTGCACTTTTGTTATTTGTGAAAATAAAAGTAAGGAGAGTATGTGAATAAAAAAATATCAT CTCATGCTACTTATTTATCCCATTAACCATGAACATATTCGGTAAACAATCTGTTAGACTATTTAATACACATGTTTACACATGAATTTATACATCAATA ATCAAAGTAGCCTAATATAAGTGTTGCATTAAAAATAGGTGTCATGTCTTTTCGTATTCAGTTATACAAGAAGGAAGTAGTGTGAGAATGGTGCAATGAG TGTCGTGTAAAAAATAACGTTACTACTTTTTTAGGGAAAAGTTGATTTACTACTTTTTGTATTTTTGAACGGTGTTGAAGTTCAAAATTGTACAAATAAT ATAATTCTTTTCTTAAACATTTGGTGTTCTCTCTTTTTAGTAGTAATAGAATCACTTTGATTTGTTTATTTATAATATTTTAAATGGAAAATATAATCCA ATTATCTGCTGTGAAAAAGTTGAAGTTGGGGCCAAAGGCCTAAAACCAGAATATTGAGAATGTGTAAGGATTTGTCTTTTTAATGAAGATTTGAAAGAAC TCTTCTTTTTCCACTATTACACAAAGATTGAGTACATCTCATACTCCCTAGAGCCTAGAATGGTGGGAGTTGCTCTTTACACGTTATAAATGGTCACAAT TTGTCCTTTATTTTACTGTTGGTGCTAAATGCTAATGATTAATATCTTCATATATAAATAATTCTTCTTATTTTAGGTTGGTGAATTTTCTGATGACAAC CGATCTGGTATCAATAGCTCTTTACATCGTATTAGTGCAATTCGGAATCGTAAGATGCAAATCATTGGCCTTACTTGCCGGGTAGGTCGAGCTGTAAATG GTAGTGCTGAAATCTTACGTGATTTGGTTGAGGATGGAGGTTCTATTTTGGTAATAGGACCTCCTGGAGTGGGTAAAACAACCTTAATCAGAGAGATTGC TAGGATGCTGGCAGATGAATTCAGGAAGCGTGTTGTAATAGTAGATACATCCAATGAAATTGGAGGTGATGGAGATGTTCCTCATGCAGGCATAGGCAGG GCAAGGAGGATGCAAGTTCCAAACGTAAATATGCAGCATAATGTTATGATTGAAGCAGTTGAAAATCATATGCCTGAAACAATTATAATTGATGAAATTG GAACAGAGCTTGAAGCATTAGCAGCCAGTACAATTGCTCAAAGAGGAGTTCAATTGGTTGGAACAGCACATGGAATGACCATTGAAAACATAATTAAAAA TCCCTCTCTTCAAATCCTTGTCGGTGGCATAGAGAGTGTAACACTTGGGGATGAGGAAGCCAGGAAAAGGAAAGTGCAGAAAACAATTCTTGAAAGGAAA GGACCTCCTACATTTATATGTGCTGTTGAGTTGATATCTAAAACTGAATGTCGTGTTCATCATAGATTAGATGCAACCGTGGATGCCATTTTGGCAGGAA AATCTCCATTATTTGAAGTTCGTCAATGGGATGATTCTGCTAATGATTTGGTGAAGTATGCTCCAATGCCTGAAAAAAGTCACGGAGAAACACCTGATTT ATCTAAAAATAATAACACGAGTTCTGATATAGAGTCTGAGGAGGAAGATGAAGAACAACCTCCTACCCTGTCCAAAAAGCAGAGTACTAGTGAATCTATA ATCAAGAGGAGTTCACCGGTGCAAGTGTATACTTACAAGATCATTGAAGCTGATCTACTACAAGTAGCAAAGGTGATGGGGCTTGAAGATTTAGTAGATG TAACTGATGACATTGGAGCTGCTGATGCAATTCTAGCATCCAGTAATGAGATGCGACAGCACCAATGGATCCGCAGTGTGGCAAAGTTCCACCAGTTACC TGTGTTTGTTATCAAGGTGCCTTCTTACTTCCTCCTTATATGTTCCTCCAATATATTCTCATTTTGTCTTTTGATGAACTTTTTGTTTCTTGCAGTCCAA TACCATGGCACAAATGGTAAAGGCAATACGTATGATCCTTGGGTTAGAGTCATTTGGCCCTACATCAAAGAAGCCATTCAGTGACTCTCTCGATATTGAA ATCGACGATGATGAACCTAAACGAAAACCATCTCTGGAAGAGATTGATGCGTTGGAGGTACAAGCCCTTTCCGTTTATTTAATTAGTATCTGGTTTTTCT CCCTGAAAGTTCCATTATATGTGCAATTATTGTTTATGCTGTGTATCAGCAGTCTATCAATTGCTTTATGTTTGTGCCCTCTTGAAAGGTTGGCCTTTTC TTCTTTTCACATTTGGCAATTAAATTAGTATAACCAACTTATATTTTTTGTCCATTCATATCATATTAAATTATTGTATTTGACTTGGAGAAAAACACAT TGCTGCCAATAAAGTGGTAAGGCCAAAAAACATTAACAAAAAGGTCATTGGTTCCATTACCAATGGTGGACATTGAAAGGTAGGTTATTTGTATCATTAA GCTCTAGTTAATGCTTTTGGCATGCCCTGAATTTGGAACGTAGCAACCTTTCATTATAATTAGGGAATAAAGTATCTCCTTATGCAAGAAGATAATTTAT CTCCTTAAATCCATTTACTATTTGACATGTGTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71712; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_213656
| Blastp | Uncharacterized protein ycf45 from Porphyra with 47.73% of identity |
|---|---|
| Blastx | Uncharacterized protein ycf45 from Porphyra with 47.91% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441375.1) |
| Pfam | Type II/IV secretion system protein (PF00437.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |